Conservation of cofitness between PP_2010 and PP_5139 in Pseudomonas putida KT2440

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2010 Cytochrome b561 1.0 PP_5139 cadmium translocating P-type ATPase 0.14 15
Pseudomonas simiae WCS417 0.61 PS417_17155 cytochrome B561 0.75 PS417_26955 ATPase P
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS19085 cytochrome b 0.75 PFLU_RS28615 heavy metal translocating P-type ATPase low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS19085 cytochrome b 0.75 PFLU_RS28615 heavy metal translocating P-type ATPase low > 109
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_2207 cytochrome b(561) 0.73 Pf6N2E2_3948 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) low > 103
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_01690 cytochrome B 0.72 AO356_10380 ATPase P low > 104
Pseudomonas sp. RS175 0.59 PFR28_01238 Cytochrome b561 0.72 PFR28_04824 Cadmium-transporting ATPase low > 88
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_3957 cytochrome b(561) 0.73 Pf1N1B4_2291 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) low > 87
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_20230 cytochrome B 0.75 AO353_08420 ATPase P low > 101
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_2569 cytochrome b(561) 0.74 PfGW456L13_959 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) low > 87
Castellaniella sp019104865 MT123 0.52 ABCV34_RS06055 cytochrome b 0.56 ABCV34_RS08945 heavy metal translocating P-type ATPase low > 48
Rhodanobacter denitrificans MT42 0.49 LRK55_RS13820 cytochrome b 0.57 LRK55_RS16995 heavy metal translocating P-type ATPase low > 63
Klebsiella michiganensis M5al 0.43 BWI76_RS13250 cytochrome b561 0.29 BWI76_RS26425 zinc/cadmium/mercury/lead-transporting ATPase low > 92
Escherichia coli ECRC62 0.41 BNILDI_14960 yodB Cytochrome b561-like protein 0.27 BNILDI_03035 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_01755 Cytochrome b561 0.26 OHPLBJKB_00234 Zinc/cadmium/lead-transporting P-type ATPase low > 73
Escherichia coli BL21 0.41 ECD_01889 cytochrome b561-like protein 0.27 ECD_03318 zinc, cobalt and lead efflux system low > 60
Escherichia coli ECOR27 0.41 NOLOHH_16170 yodB Cytochrome b561-like protein 0.27 NOLOHH_08480 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli BW25113 0.41 b1974 yodB putative cytochrome (VIMSS) 0.27 b3469 zntA zinc, cobalt and lead efflux system (NCBI) low > 76
Escherichia coli ECRC98 0.41 JDDGAC_00125 yodB Cytochrome b561-like protein 0.27 JDDGAC_20305 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECRC99 0.41 KEDOAH_02555 yodB Cytochrome b561-like protein 0.27 KEDOAH_11465 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECRC101 0.41 OKFHMN_25540 yodB Cytochrome b561-like protein 0.27 OKFHMN_16675 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECRC101 0.41 MCAODC_19855 yodB Cytochrome b561-like protein 0.27 MCAODC_07205 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECRC102 0.41 NIAGMN_02515 yodB Cytochrome b561-like protein 0.27 NIAGMN_14445 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Enterobacter asburiae PDN3 0.41 EX28DRAFT_1349 Cytochrome B561 0.27 EX28DRAFT_4303 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase low > 76
Pectobacterium carotovorum WPP14 0.40 HER17_RS17570 cytochrome b561 0.28 HER17_RS00440 zinc/cadmium/mercury/lead-transporting ATPase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF2630 Cytochrome b(561) 0.27 GFF536 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) low > 78
Dickeya dianthicola ME23 0.39 DZA65_RS17465 cytochrome b561 0.53 DZA65_RS02680 heavy metal translocating P-type ATPase low > 75
Rahnella sp. WP5 0.38 EX31_RS20010 cytochrome b 0.28 EX31_RS14850 zinc/cadmium/mercury/lead-transporting ATPase low > 89
Dickeya dianthicola 67-19 0.38 HGI48_RS16370 cytochrome b561 0.55 HGI48_RS02575 heavy metal translocating P-type ATPase low > 71
Pantoea sp. MT58 0.37 IAI47_19835 cytochrome b561 0.27 IAI47_01515 zinc/cadmium/mercury/lead-transporting ATPase low > 76
Serratia liquefaciens MT49 0.35 IAI46_04445 cytochrome b561 0.30 IAI46_00855 zinc/cadmium/mercury/lead-transporting ATPase low > 86
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS04290 cytochrome B561 0.56 RR42_RS30930 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase low > 128
Dickeya dadantii 3937 0.31 DDA3937_RS16265 cytochrome b561 0.55 DDA3937_RS02545 heavy metal translocating P-type ATPase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_04663 cytochrome b561 0.58 H281DRAFT_02297 Cd2+/Zn2+-exporting ATPase low > 103
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS19950 cytochrome b 0.41 ABZR87_RS22385 cation-translocating P-type ATPase low > 80
Escherichia coli Nissle 1917 0.29 ECOLIN_RS08200 cytochrome b561 0.27 ECOLIN_RS19835 Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 52
Escherichia fergusonii Becca 0.29 EFB2_02561 Cytochrome b561 0.26 EFB2_00347 Zinc/cadmium/lead-transporting P-type ATPase low > 86
Paraburkholderia graminis OAS925 0.29 ABIE53_000824 cytochrome b561 0.62 ABIE53_000365 Cd2+/Zn2+-exporting ATPase low > 113
Escherichia coli ECOR38 0.29 HEPCGN_26130 cybB cytochrome b561 0.27 HEPCGN_15505 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 85
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS12180 cytochrome B561 0.52 HSERO_RS08000 metal-transporting P-type ATPase transmembrane protein low > 78
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_3279 Cytochrome B561, bacterial 0.72 Psyr_4837 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_3279 Cytochrome B561, bacterial 0.72 Psyr_4837 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase low > 86

Not shown: 6 genomes with orthologs for PP_2010 only; 21 genomes with orthologs for PP_5139 only