Conservation of cofitness between PP_1824 and PP_4542 in Pseudomonas putida KT2440

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1824 Smr domain protein 1.0 PP_4542 putative ABC transporter, ATP-binding protein/permease protein 0.23 12
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5816 Smr domain protein 0.85 Pf6N2E2_2685 Lipid A export ATP-binding/permease protein MsbA low > 103
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_19510 DNA mismatch repair protein MutS 0.85 AO356_04250 multidrug ABC transporter ATP-binding protein — —
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS21310 Smr/MutS family protein 0.84 PFLU_RS22235 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.86 PFLU_RS21310 Smr/MutS family protein 0.84 PFLU_RS22235 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3774 Smr domain protein 0.85 Pf1N1B4_551 Lipid A export ATP-binding/permease protein MsbA — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_02280 DNA mismatch repair protein MutS 0.85 AO353_18265 multidrug ABC transporter ATP-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4172 Smr domain protein 0.84 PfGW456L13_4461 Lipid A export ATP-binding/permease protein MsbA low > 87
Pseudomonas sp. RS175 0.85 PFR28_03132 putative DNA endonuclease SmrA 0.86 PFR28_00745 Putative multidrug export ATP-binding/permease protein low > 88
Pseudomonas simiae WCS417 0.84 PS417_19345 DNA mismatch repair protein MutS 0.84 PS417_20540 multidrug ABC transporter ATP-binding protein — —
Pseudomonas stutzeri RCH2 0.83 Psest_1993 Uncharacterized protein conserved in bacteria 0.71 Psest_0048 ABC-type multidrug transport system, ATPase and permease components low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_1847 Smr protein/MutS2 C-terminal 0.83 Psyr_3827 ABC transporter, transmembrane region:ABC transporter low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_1847 Smr protein/MutS2 C-terminal 0.83 Psyr_3827 ABC transporter, transmembrane region:ABC transporter — —
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_11330 DNA endonuclease SmrA 0.52 CSW01_19090 ABC transporter ATP-binding protein low > 62
Alteromonas macleodii MIT1002 0.26 MIT1002_01029 putative DNA endonuclease SmrA 0.50 MIT1002_03743 Putative multidrug export ATP-binding/permease protein low > 70
Shewanella sp. ANA-3 0.24 Shewana3_2157 Smr protein/MutS2 (RefSeq) 0.51 Shewana3_1419 ABC transporter related (RefSeq) low > 73
Rahnella sp. WP5 0.24 EX31_RS07180 DNA endonuclease SmrA 0.81 EX31_RS05280 ABC transporter ATP-binding protein low > 89
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_08120 smrA SMR domain protein 0.68 OKGIIK_05135 mdlB ABC-type multidrug transport system, ATPase and permease component low > 52
Shewanella oneidensis MR-1 0.23 SO2495 Smr domain protein (NCBI ptt file) 0.51 SO3128 ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) low > 76
Rhodanobacter denitrificans MT42 0.22 LRK55_RS16370 Smr/MutS family protein 0.69 LRK55_RS01175 ABC transporter ATP-binding protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS16645 Smr/MutS family protein 0.69 LRK54_RS01410 ABC transporter ATP-binding protein/permease low > 59
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS06600 Smr/MutS family protein 0.69 ABZR86_RS07700 ABC transporter ATP-binding protein low > 74
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.3133.1 ortholog of Bordetella pertussis (BX470248) BP2475 0.67 Xcc-8004.1852.1 ABC transporter ATP-binding protein low > 74
Shewanella loihica PV-4 0.21 Shew_2418 hypothetical protein (RefSeq) 0.52 Shew_1451 ABC transporter-related protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.19 Sama_2161 hypothetical protein (RefSeq) 0.52 Sama_2206 ABC transporter, ATP-binding/permease protein, putative (RefSeq) low > 62
Dickeya dianthicola 67-19 0.18 HGI48_RS14540 endonuclease SmrB 0.21 HGI48_RS18820 ABC transporter ATP-binding protein low > 71

Not shown: 28 genomes with orthologs for PP_1824 only; 11 genomes with orthologs for PP_4542 only