Conservation of cofitness between PP_1620 and PP_4489 in Pseudomonas putida KT2440

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1620 5'(3')-nucleotidase and polyphosphatase 1.0 PP_4489 sigma-54 dependent transcriptional regulator 0.23 6
Pseudomonas fluorescens SBW25 0.86 PFLU_RS06415 5'/3'-nucleotidase SurE 0.92 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 109
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS06415 5'/3'-nucleotidase SurE 0.92 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 109
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3112 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.93 Pf1N1B4_3567 Phenylalanine hydroxylase transcriptional activator PhhR low > 87
Pseudomonas sp. S08-1 0.86 OH686_18170 5'/3'-nucleotidase SurE 0.90 OH686_21240 Phenylalanine hydroxylase transcriptional activator PhhR low > 80
Pseudomonas simiae WCS417 0.86 PS417_06350 stationary phase survival protein SurE 0.92 PS417_19895 ATPase AAA low > 88
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_16600 stationary phase survival protein SurE 0.93 AO353_18590 AAA family ATPase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_4678 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.93 PfGW456L13_4393 Phenylalanine hydroxylase transcriptional activator PhhR low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.87 Psyr_3574 Helix-turn-helix, Fis-type low > 86
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.87 Psyr_3574 Helix-turn-helix, Fis-type low > 86
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_05900 stationary phase survival protein SurE 0.94 AO356_03970 AAA family ATPase low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) 0.93 Pf6N2E2_2629 Phenylalanine hydroxylase transcriptional activator PhhR low > 103
Pseudomonas sp. RS175 0.81 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 0.93 PFR28_00803 Transcriptional regulatory protein TyrR low > 88
Pseudomonas stutzeri RCH2 0.79 Psest_2810 5'/3'-nucleotidase SurE 0.84 Psest_0782 Transcriptional regulator of aromatic amino acids metabolism low > 67
Shewanella loihica PV-4 0.51 Shew_1210 stationary-phase survival protein SurE (RefSeq) 0.38 Shew_1437 transcriptional regulator, TyrR (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_02820 5'-nucleotidase SurE 0.37 CSW01_06605 transcriptional regulator TyrR low > 62
Shewanella amazonensis SB2B 0.50 Sama_1041 surE stationary phase survival protein SurE (RefSeq) 0.39 Sama_2220 transcriptional regulatory protein TyrR (RefSeq) low > 62
Shewanella sp. ANA-3 0.50 Shewana3_1121 surE stationary phase survival protein SurE (RefSeq) 0.39 Shewana3_2779 transcriptional regulator, TyrR (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO3435 surE stationary-phase survival protein SurE (NCBI ptt file) 0.39 SO1669 tyrR transcriptional regulatory protein TyrR (NCBI ptt file) low > 76
Rahnella sp. WP5 0.48 EX31_RS07840 5'/3'-nucleotidase SurE 0.41 EX31_RS06335 transcriptional regulator TyrR low > 89
Serratia liquefaciens MT49 0.48 IAI46_03775 5'/3'-nucleotidase SurE 0.42 IAI46_13470 transcriptional regulator TyrR low > 86
Klebsiella michiganensis M5al 0.47 BWI76_RS22660 5'/3'-nucleotidase SurE 0.41 BWI76_RS12485 TyrR family transcriptional regulator low > 92
Enterobacter sp. TBS_079 0.46 MPMX20_03630 5'/3'-nucleotidase SurE 0.40 MPMX20_02454 Transcriptional regulatory protein TyrR low > 85
Escherichia coli BW25113 0.46 b2744 surE acid phosphatase (NCBI) 0.40 b1323 tyrR DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) low > 76
Escherichia coli ECRC102 0.46 NIAGMN_18250 surE 5'/3'-nucleotidase SurE 0.40 NIAGMN_26475 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC62 0.46 BNILDI_10845 surE 5'/3'-nucleotidase SurE 0.40 BNILDI_18150 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC99 0.46 KEDOAH_07660 surE 5'/3'-nucleotidase SurE 0.40 KEDOAH_26470 tyrR transcriptional regulator TyrR — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS15345 5'/3'-nucleotidase SurE 0.40 ECOLIN_RS07945 transcriptional regulator TyrR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 0.40 OHPLBJKB_02359 Transcriptional regulatory protein TyrR low > 73
Escherichia coli ECRC101 0.46 OKFHMN_20480 surE 5'/3'-nucleotidase SurE 0.40 OKFHMN_02305 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC101 0.46 MCAODC_11005 surE 5'/3'-nucleotidase SurE 0.40 MCAODC_15965 tyrR transcriptional regulator TyrR — —
Escherichia coli ECOR27 0.46 NOLOHH_12295 surE 5'/3'-nucleotidase SurE 0.40 NOLOHH_20000 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC98 0.46 JDDGAC_24145 surE 5'/3'-nucleotidase SurE 0.40 JDDGAC_04850 tyrR transcriptional regulator TyrR — —
Escherichia coli BL21 0.46 ECD_02594 broad specificity 5'(3')-nucleotidase and polyphosphatase 0.40 ECD_01300 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase low > 60
Escherichia fergusonii Becca 0.46 EFB2_01166 5'/3'-nucleotidase SurE 0.40 EFB2_02604 Transcriptional regulatory protein TyrR low > 86
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.39 EX28DRAFT_0994 Transcriptional regulator of aromatic amino acids metabolism low > 76
Escherichia coli ECOR38 0.46 HEPCGN_19660 surE 5'/3'-nucleotidase SurE 0.40 HEPCGN_25885 tyrR transcriptional regulator TyrR low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.40 GFF2679 Transcriptional repressor protein TyrR low > 78
Erwinia tracheiphila SCR3 0.45 LU632_RS06465 surE 5'/3'-nucleotidase SurE 0.40 LU632_RS11530 tyrR transcriptional regulator TyrR low > 74
Pantoea sp. MT58 0.45 IAI47_04220 5'/3'-nucleotidase SurE 0.39 IAI47_09440 transcriptional regulator TyrR low > 76

Not shown: 56 genomes with orthologs for PP_1620 only; 5 genomes with orthologs for PP_4489 only