Conservation of cofitness between PP_4475 and PP_4184 in Pseudomonas putida KT2440

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4475 succinylglutamate desuccinylase 1.0 PP_4184 branched chain amino acid transporter 0.38 11
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_02995 succinylglutamate desuccinylase 0.83 AO353_01810 branched-chain amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.84 Pf6N2E2_5860 Branched-chain amino acid transport system carrier protein low > 103
Pseudomonas sp. RS175 0.78 PFR28_03277 Succinylglutamate desuccinylase 0.84 PFR28_03091 Branched-chain amino acid transport system 2 carrier protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS23285 succinylglutamate desuccinylase 0.80 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Pseudomonas fluorescens SBW25 0.78 PFLU_RS23285 succinylglutamate desuccinylase 0.80 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_18755 succinylglutamate desuccinylase 0.84 AO356_19720 branched-chain amino acid ABC transporter substrate-binding protein low > 104
Pseudomonas simiae WCS417 0.77 PS417_21680 succinylglutamate desuccinylase 0.78 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.85 PfGW456L13_4264 Branched-chain amino acid transport system carrier protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.82 Pf1N1B4_3686 Branched-chain amino acid transport system carrier protein low > 87
Pseudomonas sp. S08-1 0.74 OH686_21320 succinylglutamate desuccinylase 0.79 OH686_01945 branched-chain amino acid transport system II carrier protein — —
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3559 succinylglutamate desuccinylase 0.82 Psyr_2015 Branched-chain amino acid transport system II carrier protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3559 succinylglutamate desuccinylase 0.82 Psyr_2015 Branched-chain amino acid transport system II carrier protein low > 86
Pseudomonas stutzeri RCH2 0.45 Psest_2717 Succinylglutamate desuccinylase 0.55 Psest_2489 branched-chain amino acid uptake carrier low > 67
Shewanella sp. ANA-3 0.35 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) 0.36 Shewana3_3332 branched-chain amino acid transport system II carrier protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.35 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) 0.36 SO0949 brnQ branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.35 Sama_1708 succinylglutamate desuccinylase (RefSeq) 0.37 Sama_2740 branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.34 MPMX26_02247 Succinylglutamate desuccinylase 0.57 MPMX26_01263 Branched-chain amino acid transport system 2 carrier protein low > 36
Shewanella loihica PV-4 0.32 Shew_1924 succinylglutamate desuccinylase (RefSeq) 0.39 Shew_0769 branched-chain amino acid transport system II carrier protein (RefSeq) — —
Enterobacter asburiae PDN3 0.32 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.70 EX28DRAFT_2573 branched-chain amino acid uptake carrier — —
Escherichia coli ECRC98 0.31 JDDGAC_01500 astE succinylglutamate desuccinylase 0.69 JDDGAC_12190 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC102 0.31 NIAGMN_01140 astE succinylglutamate desuccinylase 0.69 NIAGMN_06590 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Enterobacter sp. TBS_079 0.31 MPMX20_01869 Succinylglutamate desuccinylase 0.69 MPMX20_00988 Branched-chain amino acid transport system 2 carrier protein low > 85
Escherichia coli ECRC101 0.31 MCAODC_18485 astE succinylglutamate desuccinylase 0.69 MCAODC_27760 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC99 0.31 KEDOAH_01185 astE succinylglutamate desuccinylase 0.69 KEDOAH_19430 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC101 0.31 OKFHMN_26925 astE succinylglutamate desuccinylase 0.69 OKFHMN_08535 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.69 GFF4299 Branched-chain amino acid transport system carrier protein low > 78
Escherichia coli BW25113 0.31 b1744 astE succinylglutamate desuccinylase (NCBI) 0.69 b0401 brnQ predicted branched chain amino acid transporter (LIV-II) (NCBI) low > 76
Escherichia coli ECOR27 0.31 NOLOHH_17440 astE succinylglutamate desuccinylase 0.69 NOLOHH_01465 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01988 Succinylglutamate desuccinylase 0.69 OHPLBJKB_03275 Branched-chain amino acid transport system 2 carrier protein low > 73
Escherichia coli BL21 0.31 ECD_01713 succinylglutamate desuccinylase 0.69 ECD_00349 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val low > 60
Escherichia fergusonii Becca 0.31 EFB2_02249 Succinylglutamate desuccinylase 0.69 EFB2_03656 Branched-chain amino acid transport system 2 carrier protein low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS09725 succinylglutamate desuccinylase 0.69 ECOLIN_RS02420 branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC62 0.31 BNILDI_16225 astE succinylglutamate desuccinylase 0.69 BNILDI_22880 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Serratia liquefaciens MT49 0.31 IAI46_15315 succinylglutamate desuccinylase 0.68 IAI46_04795 branched-chain amino acid transport system II carrier protein low > 86
Escherichia coli ECOR38 0.31 HEPCGN_05290 astE succinylglutamate desuccinylase 0.69 HEPCGN_07175 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 85
Rahnella sp. WP5 0.29 EX31_RS17390 succinylglutamate desuccinylase 0.66 EX31_RS22065 branched-chain amino acid transport system II carrier protein low > 89
Klebsiella michiganensis M5al 0.29 BWI76_RS11690 succinylglutamate desuccinylase 0.67 BWI76_RS06240 branched-chain amino acid transport system 2 carrier protein BrnQ low > 92
Pantoea sp. MT58 0.28 IAI47_11075 succinylglutamate desuccinylase 0.68 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ low > 76
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_06280 succinylglutamate desuccinylase 0.37 CSW01_03485 branched-chain amino acid transport system II carrier protein low > 62

Not shown: 7 genomes with orthologs for PP_4475 only; 7 genomes with orthologs for PP_4184 only