Conservation of cofitness between PP_3601 and PP_3599 in Pseudomonas putida KT2440

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3601 galactarate dehydratase 1.0 PP_3599 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.69 2
Pseudomonas stutzeri RCH2 0.86 Psest_0377 galactarate dehydratase 0.86 Psest_0374 5-dehydro-4-deoxyglucarate dehydratase low > 67
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_5042 D-galactarate dehydratase (EC 4.2.1.42) 0.95 PfGW456L13_5045 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 87
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_1107 D-galactarate dehydratase (EC 4.2.1.42) 0.93 Pf1N1B4_1110 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_3296 D-galactarate dehydratase (EC 4.2.1.42) 0.92 Pf6N2E2_3299 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 103
Pseudomonas simiae WCS417 0.84 PS417_04210 Galactarate dehydratase (EC 4.2.1.42) (from data) 0.94 PS417_04195 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.12 50
Pseudomonas sp. RS175 0.84 PFR28_00145 Galactarate dehydratase (L-threo-forming) 0.92 PFR28_00142 putative 5-dehydro-4-deoxyglucarate dehydratase 0.60 6
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_07170 galactarate dehydratase 0.92 AO356_07185 5-dehydro-4-deoxyglucarate dehydratase low > 104
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS04250 galactarate dehydratase 0.94 PFLU_RS04235 5-dehydro-4-deoxyglucarate dehydratase 0.13 7
Pseudomonas fluorescens SBW25 0.84 PFLU_RS04250 galactarate dehydratase 0.94 PFLU_RS04235 5-dehydro-4-deoxyglucarate dehydratase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_4225 galactarate dehydratase 0.91 Psyr_4227 Dihydrodipicolinate synthetase low > 86
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_4225 galactarate dehydratase 0.91 Psyr_4227 Dihydrodipicolinate synthetase low > 86
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_05290 galactarate dehydratase 0.94 AO353_05305 5-dehydro-4-deoxyglucarate dehydratase low > 101
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS15800 Galactarate dehydratase (EC 4.2.1.42) (from data) 0.82 HSERO_RS15785 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.81 2
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS29090 galactarate dehydrogenase 0.79 RR42_RS29080 5-dehydro-4-deoxyglucarate dehydratase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.1206.1 D-galactarate dehydratase (EC 4.2.1.42) 0.48 Xcc-8004.1211.1 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 74
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_05320 galactarate dehydratase 0.78 H281DRAFT_03816 5-dehydro-4-deoxyglucarate dehydratase low > 103
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS24160 D-galactarate dehydratase 0.77 BPHYT_RS20415 5-dehydro-4-deoxyglucarate dehydratase low > 109
Variovorax sp. SCN45 0.65 GFF2921 D-galactarate dehydratase (EC 4.2.1.42) 0.72 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 127
Paraburkholderia graminis OAS925 0.65 ABIE53_006505 galactarate dehydratase 0.77 ABIE53_004431 5-dehydro-4-deoxyglucarate dehydratase low > 113
Variovorax sp. OAS795 0.64 ABID97_RS10325 galactarate dehydratase 0.71 ABID97_RS10365 5-dehydro-4-deoxyglucarate dehydratase 0.26 52
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS33575 galactarate dehydratase 0.76 QEN71_RS32490 5-dehydro-4-deoxyglucarate dehydratase low > 153
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS19730 galactarate dehydratase 0.54 RALBFv3_RS19750 5-dehydro-4-deoxyglucarate dehydratase 0.32 38
Ralstonia solanacearum UW163 0.64 UW163_RS19445 galactarate dehydratase 0.54 UW163_RS19425 5-dehydro-4-deoxyglucarate dehydratase — —
Azospirillum sp. SherDot2 0.64 MPMX19_02889 Galactarate dehydratase (L-threo-forming) 0.69 MPMX19_02894 putative 5-dehydro-4-deoxyglucarate dehydratase low > 112
Ralstonia solanacearum GMI1000 0.63 RS_RS21090 galactarate dehydratase 0.55 RS_RS21070 5-dehydro-4-deoxyglucarate dehydratase low > 80
Ralstonia solanacearum PSI07 0.63 RPSI07_RS03485 galactarate dehydratase 0.54 RPSI07_RS03465 5-dehydro-4-deoxyglucarate dehydratase low > 81
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS20320 galactarate dehydratase 0.54 ABZR87_RS20340 5-dehydro-4-deoxyglucarate dehydratase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF1502 D-galactarate dehydratase (EC 4.2.1.42) 0.74 GFF792 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 90
Acidovorax sp. GW101-3H11 0.61 Ac3H11_3953 D-galactarate dehydratase (EC 4.2.1.42) 0.73 Ac3H11_336 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 79

Not shown: 24 genomes with orthologs for PP_3601 only; 4 genomes with orthologs for PP_3599 only