Conservation of cofitness between PP_0120 and PP_1426 in Pseudomonas putida KT2440

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0120 putative zinc ABC transporter 1.0 PP_1426 L-aspartate oxidase 0.27 14
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_597 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.89 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) low > 87
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_1872 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.89 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) low > 87
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_10915 ABC transporter substrate-binding protein 0.90 AO353_17620 L-aspartate oxidase low > 101
Pseudomonas fluorescens SBW25 0.75 PFLU_RS00380 zinc ABC transporter substrate-binding protein ZnuA 0.90 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS00380 zinc ABC transporter substrate-binding protein ZnuA 0.90 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas sp. RS175 0.75 PFR28_04621 High-affinity zinc uptake system protein ZnuA 0.89 PFR28_00689 L-aspartate oxidase 0.20 79
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4165 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.85 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) low > 103
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_11480 ABC transporter substrate-binding protein 0.88 AO356_04580 L-aspartate oxidase low > 104
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0275 Periplasmic solute binding protein 0.89 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0275 Periplasmic solute binding protein 0.89 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas simiae WCS417 0.70 PS417_00390 ABC transporter substrate-binding protein 0.90 PS417_07115 L-aspartate oxidase low > 88
Pseudomonas sp. S08-1 0.67 OH686_12235 Zinc ABC transporter, substrate-binding protein ZnuA 0.87 OH686_20040 L-aspartate oxidase low > 80
Pseudomonas stutzeri RCH2 0.62 Psest_4307 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 0.86 Psest_3101 L-aspartate oxidase low > 67
Escherichia coli ECRC102 0.35 NIAGMN_01755 znuA zinc ABC transporter substrate-binding protein ZnuA 0.64 NIAGMN_19140 nadB L-aspartate oxidase — —
Escherichia coli ECRC99 0.35 KEDOAH_01800 znuA zinc ABC transporter substrate-binding protein ZnuA 0.64 KEDOAH_06850 nadB L-aspartate oxidase — —
Escherichia coli ECRC101 0.35 OKFHMN_26305 znuA zinc ABC transporter substrate-binding protein ZnuA 0.64 OKFHMN_21370 nadB L-aspartate oxidase — —
Escherichia coli ECRC101 0.35 MCAODC_19100 znuA zinc ABC transporter substrate-binding protein ZnuA 0.64 MCAODC_11900 nadB L-aspartate oxidase — —
Escherichia coli ECRC98 0.35 JDDGAC_00880 znuA zinc ABC transporter substrate-binding protein ZnuA 0.64 JDDGAC_25035 nadB L-aspartate oxidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF1636 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.64 GFF2106 L-aspartate oxidase (EC 1.4.3.16) low > 78
Pectobacterium carotovorum WPP14 0.34 HER17_RS11805 zinc ABC transporter substrate-binding protein ZnuA 0.65 HER17_RS05775 L-aspartate oxidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01871 High-affinity zinc uptake system protein ZnuA 0.64 OHPLBJKB_01133 L-aspartate oxidase low > 73
Escherichia coli BW25113 0.34 b1857 yebL putative adhesin (VIMSS) 0.64 b2574 nadB L-aspartate oxidase (NCBI) low > 76
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0699 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 0.64 EX28DRAFT_0071 L-aspartate oxidase (EC 1.4.3.16) low > 76
Escherichia coli BL21 0.34 ECD_01828 zinc ABC transporter periplasmic binding protein 0.64 ECD_02468 quinolinate synthase, L-aspartate oxidase (B protein) subunit low > 60
Escherichia fergusonii Becca 0.34 EFB2_02085 High-affinity zinc uptake system protein ZnuA 0.63 EFB2_01322 L-aspartate oxidase low > 86
Escherichia coli ECOR38 0.34 HEPCGN_04710 znuA zinc ABC transporter substrate-binding protein ZnuA 0.64 HEPCGN_20515 nadB L-aspartate oxidase low > 85
Escherichia coli Nissle 1917 0.33 ECOLIN_RS10345 zinc ABC transporter substrate-binding protein ZnuA 0.64 ECOLIN_RS14570 L-aspartate oxidase low > 52
Escherichia coli ECRC62 0.33 BNILDI_15535 znuA zinc ABC transporter substrate-binding protein ZnuA 0.64 BNILDI_11845 nadB L-aspartate oxidase — —
Escherichia coli ECOR27 0.33 NOLOHH_16745 znuA zinc ABC transporter substrate-binding protein ZnuA 0.64 NOLOHH_13045 nadB L-aspartate oxidase low > 57
Agrobacterium fabrum C58 0.33 Atu1521 ABC transporter, substrate binding protein (zinc) 0.25 Atu4097 L-aspartate oxidase low > 89
Dickeya dianthicola 67-19 0.33 HGI48_RS10130 zinc ABC transporter substrate-binding protein ZnuA 0.66 HGI48_RS15855 L-aspartate oxidase low > 71
Dickeya dadantii 3937 0.33 DDA3937_RS10100 zinc ABC transporter substrate-binding protein ZnuA 0.66 DDA3937_RS15770 L-aspartate oxidase low > 74
Klebsiella michiganensis M5al 0.33 BWI76_RS18130 zinc ABC transporter substrate-binding protein 0.64 BWI76_RS21360 L-aspartate oxidase low > 92
Pantoea sp. MT58 0.33 IAI47_08465 zinc ABC transporter substrate-binding protein ZnuA 0.64 IAI47_04845 L-aspartate oxidase low > 76
Serratia liquefaciens MT49 0.32 IAI46_14605 zinc ABC transporter substrate-binding protein ZnuA 0.66 IAI46_19590 L-aspartate oxidase low > 86
Dickeya dianthicola ME23 0.31 DZA65_RS10545 zinc ABC transporter substrate-binding protein ZnuA 0.65 DZA65_RS16935 L-aspartate oxidase low > 75
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_10400 zinc ABC transporter substrate-binding protein 0.67 CSW01_12495 L-aspartate oxidase low > 62
Magnetospirillum magneticum AMB-1 0.30 AMB_RS11665 zinc ABC transporter substrate-binding protein 0.60 AMB_RS19650 L-aspartate oxidase — —
Sinorhizobium meliloti 1021 0.29 SMc04245 high-affinity zinc uptake system ABC transporter protein 0.29 SMc02599 L-aspartate oxidase low > 103
Rahnella sp. WP5 0.29 EX31_RS10675 zinc ABC transporter substrate-binding protein ZnuA 0.64 EX31_RS21795 L-aspartate oxidase low > 89
Azospirillum sp. SherDot2 0.29 MPMX19_05515 High-affinity zinc uptake system protein ZnuA 0.26 MPMX19_05671 L-aspartate oxidase low > 112
Azospirillum brasilense Sp245 0.27 AZOBR_RS01585 zinc transporter 0.20 AZOBR_RS18685 L-aspartate oxidase low > 97
Marinobacter adhaerens HP15 0.23 HP15_2237 ABC transporter metal-binding lipoprotein 0.72 HP15_774 L-aspartate oxidase — —
Rhodopseudomonas palustris CGA009 0.16 TX73_004435 metal ABC transporter substrate-binding protein 0.25 TX73_005420 L-aspartate oxidase — —
Desulfovibrio vulgaris Hildenborough JW710 0.15 DVU1343 znuA periplasmic component of zinc ABC transporter (Dmitry Rodionov) 0.35 DVU1809 nadB L-aspartate oxidase (TIGR) — —
Acinetobacter radioresistens SK82 0.14 MPMX26_00096 High-affinity zinc uptake system protein ZnuA 0.64 MPMX26_02162 L-aspartate oxidase low > 36

Not shown: 4 genomes with orthologs for PP_0120 only; 45 genomes with orthologs for PP_1426 only