Conservation of cofitness between PP_5317 and PP_0937 in Pseudomonas putida KT2440

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5317 Probable chorismate pyruvate-lyase 1.0 PP_0937 endoribonuclease G (RNAse G) 0.15 16
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_09840 chorismate--pyruvate lyase 0.91 AO353_05230 ribonuclease G low > 101
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4063 Chorismate--pyruvate lyase (EC 4.1.3.40) 0.91 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.23 67
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_10985 chorismate--pyruvate lyase 0.91 AO356_07110 ribonuclease G low > 104
Pseudomonas sp. RS175 0.61 PFR28_04476 Chorismate pyruvate-lyase 0.91 PFR28_00158 Ribonuclease G low > 88
Pseudomonas simiae WCS417 0.60 PS417_28020 chorismate--pyruvate lyase 0.92 PS417_04270 ribonuclease G low > 88
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS29710 chorismate lyase 0.91 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_5030 chorismate lyase 0.90 Psyr_4159 RNAse G low > 86
Pseudomonas fluorescens SBW25 0.60 PFLU_RS29710 chorismate lyase 0.91 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_5030 chorismate lyase 0.90 Psyr_4159 RNAse G low > 86
Pseudomonas sp. S08-1 0.54 OH686_13475 Chorismate--pyruvate lyase 0.89 OH686_08595 Ribonuclease G low > 80
Pseudomonas stutzeri RCH2 0.53 Psest_3843 4-hydroxybenzoate synthetase (chorismate lyase) 0.89 Psest_3323 ribonuclease, Rne/Rng family low > 67
Shewanella amazonensis SB2B 0.26 Sama_3623 putative chorismate--pyruvate lyase (RefSeq) 0.56 Sama_0471 ribonuclease G (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.25 MIT1002_00068 Chorismate--pyruvate lyase 0.59 MIT1002_00224 Ribonuclease G 0.71 42
Shewanella oneidensis MR-1 0.23 SO0131 hypothetical chorismate pyruvate lyase (NCBI ptt file) 0.56 SO4094 cafA ribonuclease G (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.22 HP15_3352 chorismate-pyruvate lyase 0.68 HP15_2451 ribonuclease, Rne/Rng family low > 73
Shewanella loihica PV-4 0.22 Shew_3743 chorismate lyase (RefSeq) 0.56 Shew_0407 ribonuclease G (RefSeq) low > 60
Shewanella sp. ANA-3 0.21 Shewana3_0125 chorismate lyase (RefSeq) 0.57 Shewana3_3644 ribonuclease G (RefSeq) low > 73
Dechlorosoma suillum PS 0.21 Dsui_3290 4-hydroxybenzoate synthetase (chorismate lyase) 0.58 Dsui_0434 ribonuclease, Rne/Rng family low > 51
Pantoea sp. MT58 0.21 IAI47_17910 chorismate lyase 0.57 IAI47_02455 ribonuclease G low > 76
Escherichia coli BW25113 0.20 b4039 ubiC chorismate lyase (VIMSS) 0.57 b3247 cafA bundles of cytoplasmic filaments (VIMSS) low > 76
Escherichia coli ECOR38 0.20 HEPCGN_11605 ubiC chorismate lyase 0.57 HEPCGN_16610 rng ribonuclease G low > 85
Escherichia coli BL21 0.20 ECD_03911 chorismate--pyruvate lyase 0.57 ECD_03106 ribonuclease G low > 60
Escherichia coli ECOR27 0.20 NOLOHH_05240 ubiC chorismate lyase 0.57 NOLOHH_09530 rng ribonuclease G low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_04004 Chorismate pyruvate-lyase 0.57 OHPLBJKB_00458 Ribonuclease G low > 73
Escherichia coli ECRC99 0.20 KEDOAH_15075 ubiC chorismate lyase 0.57 KEDOAH_10405 rng ribonuclease G — —
Escherichia coli ECRC101 0.20 OKFHMN_13085 ubiC chorismate lyase 0.57 OKFHMN_17745 rng ribonuclease G — —
Escherichia coli ECRC98 0.20 JDDGAC_16710 ubiC chorismate lyase 0.57 JDDGAC_21370 rng ribonuclease G — —
Escherichia coli ECRC101 0.20 MCAODC_03585 ubiC chorismate lyase 0.57 MCAODC_08265 rng ribonuclease G — —
Escherichia coli ECRC102 0.20 NIAGMN_10835 ubiC chorismate lyase 0.57 NIAGMN_15505 rng ribonuclease G — —
Dickeya dianthicola ME23 0.20 DZA65_RS02870 chorismate lyase 0.57 DZA65_RS01430 ribonuclease G low > 75
Klebsiella michiganensis M5al 0.20 BWI76_RS01855 chorismate lyase 0.58 BWI76_RS25480 ribonuclease E/G low > 92
Escherichia fergusonii Becca 0.20 EFB2_04564 Chorismate pyruvate-lyase 0.57 EFB2_00584 Ribonuclease G low > 86
Escherichia coli ECRC62 0.20 BNILDI_06280 ubiC chorismate lyase 0.57 BNILDI_01990 rng ribonuclease G — —
Dickeya dianthicola 67-19 0.20 HGI48_RS02715 chorismate lyase 0.57 HGI48_RS01370 ribonuclease G low > 71
Escherichia coli Nissle 1917 0.20 ECOLIN_RS23315 chorismate lyase 0.57 ECOLIN_RS18605 ribonuclease G low > 52
Enterobacter sp. TBS_079 0.19 MPMX20_00255 Chorismate pyruvate-lyase 0.57 MPMX20_04153 Ribonuclease G low > 85
Rahnella sp. WP5 0.19 EX31_RS11825 chorismate lyase 0.57 EX31_RS12255 ribonuclease G low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF1408 Chorismate--pyruvate lyase (EC 4.1.3.40) 0.57 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.82 30
Erwinia tracheiphila SCR3 0.16 LU632_RS22335 ubiC chorismate lyase 0.56 LU632_RS21430 rng ribonuclease G low > 74

Not shown: 0 genomes with orthologs for PP_5317 only; 33 genomes with orthologs for PP_0937 only