Conservation of cofitness between PP_5346 and PP_0293 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5346 pyruvate carboxylase subunit B 1.0 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.61 9
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_729 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.97 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.68 26
Pseudomonas sp. RS175 0.97 PFR28_04517 Oxaloacetate decarboxylase alpha chain 0.98 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF 0.27 39
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_12025 pyruvate carboxylase subunit B 0.98 AO356_09795 imidazole glycerol phosphate synthase subunit HisF 0.49 66
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_4279 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.98 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) — —
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_10025 pyruvate carboxylase subunit B 0.97 AO353_12090 imidazole glycerol phosphate synthase subunit HisF 0.67 47
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2011 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.98 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) — —
Pseudomonas simiae WCS417 0.95 PS417_28210 pyruvate carboxylase subunit B 0.97 PS417_01580 imidazole glycerol phosphate synthase — —
Pseudomonas fluorescens SBW25 0.95 PFLU_RS29875 oxaloacetate decarboxylase subunit alpha 0.98 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS29875 oxaloacetate decarboxylase subunit alpha 0.98 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_5060 Oxaloacetate decarboxylase, alpha subunit 0.97 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF — —
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_5060 Oxaloacetate decarboxylase, alpha subunit 0.97 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.38 81
Pseudomonas sp. S08-1 0.88 OH686_13205 oxaloacetate decarboxylase alpha subunit 0.92 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_4084 oxaloacetate decarboxylase alpha subunit 0.92 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit — —
Marinobacter adhaerens HP15 0.65 HP15_3935 pyruvate carboxylase subunit B 0.82 HP15_3009 protein containing histidine biosynthesis, HisF domain — —
Shewanella amazonensis SB2B 0.48 Sama_1052 oxaloacetate decarboxylase (RefSeq) 0.38 Sama_1947 imidazole glycerol phosphate synthase subunit HisF (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_04100 oxaloacetate decarboxylase subunit alpha 0.42 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit low > 62
Shewanella loihica PV-4 0.47 Shew_1220 pyruvate carboxylase subunit B (RefSeq) 0.36 Shew_2203 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.63 50
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF225 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) 0.41 GFF3907 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) low > 78
Alteromonas macleodii MIT1002 0.46 MIT1002_01135 Methylmalonyl-CoA carboxyltransferase 5S subunit 0.40 MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF low > 70
Klebsiella michiganensis M5al 0.46 BWI76_RS04420 oxaloacetate decarboxylase 0.40 BWI76_RS18950 imidazole glycerol phosphate synthase cyclase subunit low > 92
Shewanella sp. ANA-3 0.45 Shewana3_3165 oxaloacetate decarboxylase (RefSeq) 0.39 Shewana3_1848 imidazole glycerol phosphate synthase subunit HisF (RefSeq) low > 73
Methanococcus maripaludis S2 0.45 MMP_RS01820 sodium-extruding oxaloacetate decarboxylase subunit alpha 0.56 MMP_RS08865 imidazole glycerol phosphate synthase subunit HisF — —
Methanococcus maripaludis JJ 0.45 MMJJ_RS03560 sodium-extruding oxaloacetate decarboxylase subunit alpha 0.57 MMJJ_RS05490 imidazole glycerol phosphate synthase subunit HisF — —
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS10030 oxaloacetate decarboxylase 0.52 ABI39_RS19930 imidazole glycerol phosphate synthase subunit HisF low > 72
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS14410 oxaloacetate decarboxylase 0.52 HMPREF1058_RS06175 imidazole glycerol phosphate synthase subunit HisF low > 67
Bacteroides stercoris CC31F 0.14 HMPREF1181_RS05570 pyruvate carboxylase subunit B 0.51 HMPREF1181_RS11070 imidazole glycerol phosphate synthase subunit HisF low > 56
Bacteroides ovatus ATCC 8483 0.14 BACOVA_04453 Biotin-requiring enzyme 0.52 BACOVA_00219 imidazoleglycerol phosphate synthase, cyclase subunit low > 94
Bacteroides thetaiotaomicron VPI-5482 0.14 BT1697 pyruvate carboxylase subunit B (NCBI ptt file) 0.51 BT1378 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) low > 81

Not shown: 0 genomes with orthologs for PP_5346 only; 73 genomes with orthologs for PP_0293 only