| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens SBW25 | 1.0 | PFLU_RS04350 | | metalloprotease PmbA | 1.0 | PFLU_RS27695 | | CBS domain-containing protein | 0.77 | 1 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS04350 | | metalloprotease PmbA | 1.00 | PFLU_RS27695 | | CBS domain-containing protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.98 | PS417_04295 | | peptidase PmbA | 0.93 | PS417_26055 | | cyclic nucleotide-binding protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.96 | AO356_07085 | | peptidase PmbA | 0.90 | AO356_14090 | | cyclic nucleotide-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.95 | Pf6N2E2_3278 | | TldE protein, part of TldE/TldD proteolytic complex | 0.89 | Pf6N2E2_4750 | | Predicted signal-transduction protein containing cAMP-binding and CBS domains | low | > 103 |
| Pseudomonas sp. RS175 | 0.95 | PFR28_00163 | | Metalloprotease PmbA | 0.89 | PFR28_04112 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.93 | AO353_05205 | | peptidase PmbA | 0.90 | AO353_07570 | | cyclic nucleotide-binding protein | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_5024 | | TldE protein, part of TldE/TldD proteolytic complex | 0.86 | PfGW456L13_1137 | | Predicted signal-transduction protein containing cAMP-binding and CBS domains | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_1090 | | TldE protein, part of TldE/TldD proteolytic complex | 0.89 | Pf1N1B4_2476 | | Predicted signal-transduction protein containing cAMP-binding and CBS domains | low | > 87 |
| Pseudomonas putida KT2440 | 0.90 | PP_0942 | | regulatory protease | 0.82 | PP_0354 | | CBS domain protein | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.89 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.83 | Psyr_4702 | | Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase DUF294 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.89 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.83 | Psyr_4702 | | Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase DUF294 | low | > 86 |
| Pseudomonas sp. S08-1 | 0.81 | OH686_08570 | | TldE protein, part of TldE/TldD proteolytic complex | 0.70 | OH686_10490 | | Predicted signal-transduction protein containing cAMP-binding and CBS domains | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.77 | Psest_3318 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.71 | Psest_0350 | | Predicted signal-transduction protein containing cAMP-binding and CBS domains | low | > 67 |
| Shewanella sp. ANA-3 | 0.51 | Shewana3_3631 | | microcin-processing peptidase 1 (RefSeq) | 0.18 | Shewana3_1576 | | cyclic nucleotide-binding protein (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.50 | Sama_0482 | | PmbA protein (RefSeq) | 0.20 | Sama_1524 | | CBS domain-containing protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.50 | SO4078 | pmbA | pmba protein (NCBI ptt file) | 0.18 | SO2856 | | CBS domain protein (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.50 | Shew_0416 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.20 | Shew_2369 | | cyclic nucleotide-binding protein (RefSeq) | low | > 60 |
| Dechlorosoma suillum PS | 0.48 | Dsui_1234 | | putative Zn-dependent protease-like protein | 0.35 | Dsui_2004 | | putative signal-transduction protein containing cAMP-binding and CBS domains | low | > 51 |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_12845 | | metalloprotease PmbA | 0.18 | CSW01_06525 | | cyclic nucleotide-binding protein | low | > 62 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS09660 | | metalloprotease PmbA | 0.11 | ABZR87_RS07940 | | DUF294 nucleotidyltransferase-like domain-containing protein | low | > 80 |
| Azospirillum brasilense Sp245 | 0.29 | AZOBR_RS11930 | | modulator protein | 0.09 | AZOBR_RS02945 | | hypothetical protein | 0.32 | 37 |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_01886 | | Metalloprotease PmbA | 0.09 | MPMX19_02431 | | hypothetical protein | low | > 112 |
| Dinoroseobacter shibae DFL-12 | 0.27 | Dshi_0064 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.17 | Dshi_3557 | | putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase (RefSeq) | low | > 64 |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A0575 | | Peptidase U62, modulator of DNA gyrase (NCBI) | 0.09 | Rru_A0634 | | Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) | low | > 58 |
Not shown: 62 genomes with orthologs for PFLU_RS04350 only; 3 genomes with orthologs for PFLU_RS27695 only