| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens SBW25 | 1.0 | PFLU_RS25515 | | tryptophan 2,3-dioxygenase | 1.0 | PFLU_RS07810 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.60 | 6 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS25515 | | tryptophan 2,3-dioxygenase | 1.00 | PFLU_RS07810 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 109 |
| Pseudomonas simiae WCS417 | 0.99 | PS417_23705 | | Tryptophan 2,3-dioxygenase (EC 1.13.11.11) (from data) | 0.95 | PS417_07740 | | tRNA-dihydrouridine synthase A | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_05970 | | Tryptophan 2,3-dioxygenase (EC 1.13.11.11) (from data) | 0.86 | AO353_00295 | | tRNA-dihydrouridine synthase A | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.88 | PfGW456L13_4292 | | Tryptophan 2,3-dioxygenase (EC 1.13.11.11) (from data) | 0.80 | PfGW456L13_3987 | | tRNA dihydrouridine synthase A | low | > 87 |
| Ralstonia sp. UNC404CL21Col | 0.71 | ABZR87_RS09110 | | tryptophan 2,3-dioxygenase | 0.53 | ABZR87_RS11300 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS20190 | | tryptophan 2,3-dioxygenase | 0.54 | RPSI07_RS17630 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.71 | RS_RS03820 | | tryptophan 2,3-dioxygenase | 0.54 | RS_RS06510 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.70 | RALBFv3_RS13035 | | tryptophan 2,3-dioxygenase | 0.54 | RALBFv3_RS15730 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 76 |
| Ralstonia solanacearum UW163 | 0.70 | UW163_RS00530 | | tryptophan 2,3-dioxygenase | 0.54 | UW163_RS13175 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Burkholderia phytofirmans PsJN | 0.70 | BPHYT_RS16035 | | tryptophan 2,3-dioxygenase | 0.54 | BPHYT_RS08700 | | tRNA-dihydrouridine synthase A | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS15390 | | Tryptophan 2,3-dioxygenase (EC 1.13.11.11) (from data) | 0.55 | RR42_RS12665 | | tRNA-dihydrouridine synthase A | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.69 | H281DRAFT_04144 | | Tryptophan 2,3-dioxygenase holoenzyme /Tryptophan 2,3-dioxygenase apoenzyme | 0.53 | H281DRAFT_00766 | | tRNA-U16,U17-dihydrouridine synthase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.69 | ABIE53_003381 | | tryptophan 2,3-dioxygenase | 0.53 | ABIE53_001975 | | tRNA-dihydrouridine synthase A | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.68 | QEN71_RS02670 | | tryptophan 2,3-dioxygenase | 0.55 | QEN71_RS22650 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.62 | GFF3414 | | Tryptophan 2,3-dioxygenase (EC 1.13.11.11) | 0.51 | GFF4791 | | tRNA dihydrouridine synthase A | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.62 | Ac3H11_1156 | | Tryptophan 2,3-dioxygenase (EC 1.13.11.11) | 0.51 | Ac3H11_2288 | | tRNA dihydrouridine synthase A | low | > 79 |
| Variovorax sp. SCN45 | 0.61 | GFF3921 | | Tryptophan 2,3-dioxygenase (EC 1.13.11.11) | 0.51 | GFF928 | | tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) | low | > 127 |
| Variovorax sp. OAS795 | 0.60 | ABID97_RS08590 | | tryptophan 2,3-dioxygenase | 0.54 | ABID97_RS13915 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 91 |
| Azospirillum sp. SherDot2 | 0.56 | MPMX19_05268 | | Tryptophan 2,3-dioxygenase | 0.53 | MPMX19_00670 | | tRNA-dihydrouridine(20/20a) synthase | low | > 112 |
| Phaeobacter inhibens DSM 17395 | 0.53 | PGA1_c09970 | | tryptophan 2,3-dioxygenase KynA | 0.45 | PGA1_c19230 | | tRNA-dihydrouridine synthase A | low | > 62 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_16090 | | tryptophan 2,3-dioxygenase | 0.57 | IAI46_22970 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 86 |
| Caulobacter crescentus NA1000 Δfur | 0.46 | CCNA_02980 | | tryptophan 2,3-dioxygenase | 0.48 | CCNA_01364 | | NIFR3-like protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.46 | CCNA_02980 | | tryptophan 2,3-dioxygenase | 0.48 | CCNA_01364 | | NIFR3-like protein | low | > 66 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.46 | A4249_RS14030 | | tryptophan 2,3-dioxygenase | 0.47 | A4249_RS10515 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 48 |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS05870 | | tryptophan 2,3-dioxygenase family protein | 0.51 | LRK54_RS05995 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS05625 | | tryptophan 2,3-dioxygenase family protein | 0.51 | LRK55_RS05750 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.43 | OKGIIK_00760 | tDO2 | Tryptophan 2,3-dioxygenase (vermilion) | 0.51 | OKGIIK_00625 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | low | > 52 |
| Lysobacter sp. OAE881 | 0.43 | ABIE51_RS04055 | | tryptophan 2,3-dioxygenase family protein | 0.48 | ABIE51_RS03925 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.573.1 | | Tryptophan 2,3-dioxygenase (EC 1.13.11.11) | 0.47 | Xcc-8004.5010.1 | | tRNA dihydrouridine synthase A | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS18455 | | tryptophan 2,3-dioxygenase family protein | 0.52 | ABZR86_RS18350 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.17 | MIT1002_01154 | | Tryptophan 2,3-dioxygenase | 0.50 | MIT1002_03387 | | putative tRNA-dihydrouridine synthase | low | > 70 |
Not shown: 2 genomes with orthologs for PFLU_RS25515 only; 52 genomes with orthologs for PFLU_RS07810 only