Conservation of cofitness between OKFHMN_12000 and OKFHMN_08535 in Escherichia coli ECRC100

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_12000 tamA autotransporter assembly complex protein TamA 1.0 OKFHMN_08535 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.55 17
Escherichia coli ECRC101 1.00 MCAODC_02515 tamA autotransporter assembly complex protein TamA 1.00 MCAODC_27760 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 87
Escherichia coli ECRC62 1.00 BNILDI_07255 tamA autotransporter assembly complex protein TamA 1.00 BNILDI_22880 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 75
Escherichia coli ECRC99 1.00 KEDOAH_16155 tamA autotransporter assembly complex protein TamA 1.00 KEDOAH_19430 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC102 1.00 NIAGMN_09850 tamA autotransporter assembly complex protein TamA 1.00 NIAGMN_06590 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECOR27 1.00 NOLOHH_04260 tamA autotransporter assembly complex protein TamA 1.00 NOLOHH_01465 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 75
Escherichia coli ECRC98 1.00 JDDGAC_15640 tamA autotransporter assembly complex protein TamA 1.00 JDDGAC_12190 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.81 66
Escherichia coli BW25113 1.00 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) 1.00 b0401 brnQ predicted branched chain amino acid transporter (LIV-II) (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03813 Translocation and assembly module subunit TamA 1.00 OHPLBJKB_03275 Branched-chain amino acid transport system 2 carrier protein low > 73
Escherichia coli ECOR38 1.00 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 1.00 HEPCGN_07175 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 87
Escherichia coli BL21 1.00 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit 1.00 ECD_00349 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val low > 61
Escherichia fergusonii Becca 1.00 EFB2_04309 Translocation and assembly module subunit TamA 1.00 EFB2_03656 Branched-chain amino acid transport system 2 carrier protein low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24510 autotransporter assembly complex protein TamA 1.00 ECOLIN_RS02420 branched-chain amino acid transporter carrier protein BrnQ low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF874 Uncharacterized protein YtfM precursor 0.96 GFF4299 Branched-chain amino acid transport system carrier protein low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_00503 Translocation and assembly module subunit TamA 0.92 MPMX20_00988 Branched-chain amino acid transport system 2 carrier protein low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_3406 Outer membrane protein 0.92 EX28DRAFT_2573 branched-chain amino acid uptake carrier low > 76
Klebsiella michiganensis M5al 0.83 BWI76_RS02775 outer membrane protein assembly factor 0.93 BWI76_RS06240 branched-chain amino acid transport system 2 carrier protein BrnQ low > 92
Serratia liquefaciens MT49 0.73 IAI46_01770 outer membrane protein assembly factor 0.78 IAI46_04795 branched-chain amino acid transport system II carrier protein low > 86
Pectobacterium carotovorum WPP14 0.72 HER17_RS03980 autotransporter assembly complex protein TamA 0.79 HER17_RS16020 branched-chain amino acid transport system II carrier protein low > 75
Pantoea sp. MT58 0.72 IAI47_02715 outer membrane protein assembly factor 0.80 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ low > 76
Rahnella sp. WP5 0.72 EX31_RS08695 outer membrane protein assembly factor 0.76 EX31_RS22065 branched-chain amino acid transport system II carrier protein low > 89
Erwinia tracheiphila SCR3 0.72 LU632_RS02105 autotransporter assembly complex protein TamA 0.75 LU632_RS18890 brnQ branched-chain amino acid transport system II carrier protein low > 74
Dickeya dadantii 3937 0.69 DDA3937_RS17160 outer membrane protein assembly factor 0.77 DDA3937_RS05445 branched-chain amino acid transport system II carrier protein low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS17215 outer membrane protein assembly factor 0.77 HGI48_RS05505 branched-chain amino acid transport system II carrier protein low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS18295 outer membrane protein assembly factor 0.77 DZA65_RS05830 branched-chain amino acid transport system II carrier protein low > 75
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_12905 outer membrane protein assembly factor 0.36 CSW01_03485 branched-chain amino acid transport system II carrier protein low > 62
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3997 Uncharacterized protein YtfM precursor 0.66 Pf1N1B4_3686 Branched-chain amino acid transport system carrier protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_01050 hypothetical protein 0.68 AO356_19720 branched-chain amino acid ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_144 Uncharacterized protein YtfM precursor 0.67 Pf6N2E2_5860 Branched-chain amino acid transport system carrier protein low > 103
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2601 Uncharacterized protein YtfM precursor 0.67 PfGW456L13_4264 Branched-chain amino acid transport system carrier protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_27865 hypothetical protein 0.66 AO353_01810 branched-chain amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.67 Psyr_2015 Branched-chain amino acid transport system II carrier protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.67 Psyr_2015 Branched-chain amino acid transport system II carrier protein low > 86
Pseudomonas sp. RS175 0.28 PFR28_02752 Translocation and assembly module subunit TamA 0.67 PFR28_03091 Branched-chain amino acid transport system 2 carrier protein low > 88
Pseudomonas fluorescens SBW25 0.28 PFLU_RS18920 outer membrane protein assembly factor 0.65 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS18920 outer membrane protein assembly factor 0.65 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Pseudomonas simiae WCS417 0.27 PS417_16970 membrane protein 0.63 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein low > 88
Pseudomonas putida KT2440 0.27 PP_2892 conserved exported protein of unknown function 0.67 PP_4184 branched chain amino acid transporter low > 96
Pseudomonas stutzeri RCH2 0.27 Psest_2132 Outer membrane protein 0.52 Psest_2489 branched-chain amino acid uptake carrier low > 67
Shewanella amazonensis SB2B 0.27 Sama_1616 hypothetical protein (RefSeq) 0.35 Sama_2740 branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) low > 62
Shewanella loihica PV-4 0.25 Shew_2172 surface antigen (D15) (RefSeq) 0.38 Shew_0769 branched-chain amino acid transport system II carrier protein (RefSeq) — —
Shewanella oneidensis MR-1 0.25 SO2114 conserved hypothetical protein (NCBI ptt file) 0.34 SO0949 brnQ branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.25 Shewana3_1894 surface antigen (D15) (RefSeq) 0.35 Shewana3_3332 branched-chain amino acid transport system II carrier protein (RefSeq) low > 73

Not shown: 21 genomes with orthologs for OKFHMN_12000 only; 4 genomes with orthologs for OKFHMN_08535 only