Conservation of cofitness between NOLOHH_16910 and NOLOHH_03520 in Escherichia coli ECOR27

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_16910 yobA CopC domain-containing protein YobA 1.0 NOLOHH_03520 radA DNA repair protein RadA 0.59 16
Escherichia coli ECRC62 1.00 BNILDI_15705 yobA CopC domain-containing protein YobA 1.00 BNILDI_08075 radA DNA repair protein RadA low > 75
Escherichia coli BW25113 1.00 b1841 yobA hypothetical protein (NCBI) 1.00 b4389 radA predicted repair protein (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS10250 CopC domain-containing protein YobA 1.00 ECOLIN_RS25190 DNA repair protein RadA — —
Escherichia coli BL21 1.00 ECD_01812 CopC family protein 1.00 ECD_04265 DNA repair protein low > 61
Escherichia fergusonii Becca 1.00 EFB2_02103 Protein YobA 1.00 EFB2_04057 DNA repair protein RadA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01890 Protein YobA 1.00 OHPLBJKB_03672 DNA repair protein RadA low > 73
Escherichia coli ECRC100 0.99 OKFHMN_26400 yobA CopC domain-containing protein YobA 1.00 OKFHMN_11195 radA DNA repair protein RadA low > 80
Escherichia coli ECRC101 0.99 MCAODC_19005 yobA CopC domain-containing protein YobA 1.00 MCAODC_01710 radA DNA repair protein RadA low > 87
Escherichia coli ECRC99 0.99 KEDOAH_01705 yobA CopC domain-containing protein YobA 1.00 KEDOAH_16960 radA DNA repair protein RadA — —
Escherichia coli ECRC102 0.99 NIAGMN_01660 yobA CopC domain-containing protein YobA 1.00 NIAGMN_09045 radA DNA repair protein RadA — —
Escherichia coli ECRC98 0.99 JDDGAC_00975 yobA CopC domain-containing protein YobA 1.00 JDDGAC_14790 radA DNA repair protein RadA low > 86
Escherichia coli ECOR38 0.98 HEPCGN_04800 yobA CopC domain-containing protein YobA 1.00 HEPCGN_09195 radA DNA repair protein RadA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF1620 Copper resistance protein CopC 0.99 GFF1057 DNA repair protein RadA low > 78
Enterobacter asburiae PDN3 0.56 EX28DRAFT_0713 Uncharacterized protein, homolog of Cu resistance protein CopC 0.97 EX28DRAFT_3597 DNA repair protein RadA low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_02748 Protein YobA 0.97 MPMX20_00694 DNA repair protein RadA low > 85
Klebsiella michiganensis M5al 0.52 BWI76_RS18060 hypothetical protein 0.97 BWI76_RS04165 DNA repair protein RadA low > 92
Serratia liquefaciens MT49 0.45 IAI46_10005 CopC domain-containing protein YobA 0.93 IAI46_02945 DNA repair protein RadA — —
Erwinia tracheiphila SCR3 0.45 LU632_RS13300 yobA CopC domain-containing protein YobA 0.94 LU632_RS02550 radA DNA repair protein RadA low > 74
Rahnella sp. WP5 0.40 EX31_RS24770 copper homeostasis periplasmic binding protein CopC 0.94 EX31_RS04030 DNA repair protein RadA low > 89
Dickeya dadantii 3937 0.33 DDA3937_RS10160 copper homeostasis periplasmic binding protein CopC 0.87 DDA3937_RS02420 DNA repair protein RadA low > 74
Dickeya dianthicola ME23 0.33 DZA65_RS10605 copper homeostasis periplasmic binding protein CopC 0.88 DZA65_RS02485 DNA repair protein RadA — —
Dickeya dianthicola 67-19 0.32 HGI48_RS10190 copper homeostasis periplasmic binding protein CopC 0.87 HGI48_RS02380 DNA repair protein RadA low > 71
Rhizobium sp. OAE497 0.32 ABIE40_RS22750 copper homeostasis periplasmic binding protein CopC 0.40 ABIE40_RS06280 DNA repair protein RadA low > 107
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_26590 hypothetical protein 0.63 AO353_13980 DNA repair protein RadA low > 101
Pseudomonas simiae WCS417 0.30 PS417_17345 hypothetical protein 0.63 PS417_24305 DNA repair protein RadA low > 88
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS16425 copper resistance protein 0.54 BPHYT_RS12235 DNA repair protein RadA — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS19270 copper homeostasis periplasmic binding protein CopC 0.64 PFLU_RS26230 DNA repair protein RadA low > 109
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS19270 copper homeostasis periplasmic binding protein CopC 0.64 PFLU_RS26230 DNA repair protein RadA low > 109
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS02285 copper homeostasis periplasmic binding protein CopC 0.55 QEN71_RS06320 DNA repair protein RadA low > 153
Castellaniella sp019104865 MT123 0.27 ABCV34_RS03900 copper homeostasis periplasmic binding protein CopC 0.52 ABCV34_RS02345 DNA repair protein RadA low > 48
Paraburkholderia graminis OAS925 0.26 ABIE53_005709 methionine-rich copper-binding protein CopC 0.54 ABIE53_002526 DNA repair protein RadA/Sms low > 113
Ralstonia solanacearum PSI07 0.25 RPSI07_RS02370 copper resistance protein C 0.53 RPSI07_RS17270 DNA repair protein RadA low > 81
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_1495 Copper resistance protein CopC 0.64 Psyr_4275 DNA replication and repair protein RadA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_1495 Copper resistance protein CopC 0.64 Psyr_4275 DNA replication and repair protein RadA low > 86
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_3976 Copper resistance protein C precursor 0.64 PfGW456L13_1442 DNA repair protein RadA low > 87
Acinetobacter radioresistens SK82 0.24 MPMX26_03122 Protein YobA 0.58 MPMX26_02235 DNA repair protein RadA low > 36
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_46 Copper resistance protein C precursor 0.64 Pf1N1B4_2768 DNA repair protein RadA low > 87
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS35360 copper resistance protein CopC 0.55 RR42_RS12030 DNA repair protein RadA — —
Magnetospirillum magneticum AMB-1 0.22 AMB_RS01165 hypothetical protein 0.42 AMB_RS10555 DNA repair protein RadA low > 64
Ralstonia solanacearum GMI1000 0.22 RS_RS20270 copper resistance protein C 0.53 RS_RS06880 DNA repair protein RadA low > 80
Ralstonia solanacearum UW163 0.21 UW163_RS22010 copper resistance protein C 0.53 UW163_RS13540 DNA repair protein RadA — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS20875 copper resistance protein C 0.53 RALBFv3_RS00210 DNA repair protein RadA low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS03230 copper homeostasis periplasmic binding protein CopC 0.40 A4249_RS03745 DNA repair protein RadA low > 48
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS21865 copper homeostasis periplasmic binding protein CopC 0.54 ABZR87_RS11670 DNA repair protein RadA — —
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_5550 Copper resistance protein C precursor 0.63 Pf6N2E2_5076 DNA repair protein RadA low > 103
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_18130 copper resistance protein CopC 0.63 AO356_15680 DNA repair protein RadA low > 104

Not shown: 0 genomes with orthologs for NOLOHH_16910 only; 55 genomes with orthologs for NOLOHH_03520 only