Conservation of cofitness between MCAODC_10775 and MCAODC_27140 in Escherichia coli ECRC101

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_10775 relA GTP diphosphokinase 1.0 MCAODC_27140 gcl glyoxylate carboligase 0.61 17
Escherichia coli BW25113 1.00 b2784 relA (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) 1.00 b0507 gcl glyoxylate carboligase (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_18020 relA GTP diphosphokinase 1.00 NIAGMN_05975 gcl glyoxylate carboligase
Escherichia coli ECRC62 1.00 BNILDI_10630 relA GTP diphosphokinase 1.00 BNILDI_22335 gcl glyoxylate carboligase low > 75
Escherichia coli ECOR27 1.00 NOLOHH_12125 relA GTP diphosphokinase 1.00 NOLOHH_00905 gcl glyoxylate carboligase low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15515 GTP diphosphokinase 1.00 ECOLIN_RS02955 glyoxylate carboligase low > 55
Escherichia coli BL21 1.00 ECD_02629 (p)ppGpp synthetase I/GTP pyrophosphokinase 1.00 ECD_00457 glyoxylate carboligase low > 61
Escherichia coli ECOR38 1.00 HEPCGN_19500 relA GTP diphosphokinase 0.99 HEPCGN_06560 gcl glyoxylate carboligase low > 87
Escherichia coli ECRC99 1.00 KEDOAH_07880 relA GTP diphosphokinase 1.00 KEDOAH_20045 gcl glyoxylate carboligase
Escherichia coli ECRC98 1.00 JDDGAC_23915 relA GTP diphosphokinase 1.00 JDDGAC_11570 gcl glyoxylate carboligase low > 86
Escherichia coli ECRC100 1.00 OKFHMN_20250 relA GTP diphosphokinase 1.00 OKFHMN_07925 gcl glyoxylate carboligase low > 80
Escherichia fergusonii Becca 1.00 EFB2_01133 GTP pyrophosphokinase 1.00 EFB2_03554 Glyoxylate carboligase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00947 GTP pyrophosphokinase 1.00 OHPLBJKB_03173 Glyoxylate carboligase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4837 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 0.97 GFF4423 Glyoxylate carboligase (EC 4.1.1.47) low > 78
Klebsiella michiganensis M5al 0.94 BWI76_RS22805 GTP diphosphokinase 0.94 BWI76_RS06990 glyoxylate carboligase low > 92
Rahnella sp. WP5 0.85 EX31_RS07955 GTP diphosphokinase 0.86 EX31_RS04590 glyoxylate carboligase low > 89
Pseudomonas sp. RS175 0.47 PFR28_03223 GTP pyrophosphokinase 0.76 PFR28_03110 Glyoxylate carboligase low > 88
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_2035 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) 0.77 PfGW456L13_4295 Glyoxylate carboligase (EC 4.1.1.47) low > 87
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_19060 (p)ppGpp synthetase 0.77 AO356_19620 glyoxylate carboligase low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5723 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) 0.77 Pf6N2E2_5839 Glyoxylate carboligase (EC 4.1.1.47) low > 103
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_02710 (p)ppGpp synthetase 0.76 AO353_01920 glyoxylate carboligase low > 101
Pseudomonas fluorescens SBW25 0.47 PFLU_RS22095 GTP diphosphokinase 0.76 PFLU_RS08870 glyoxylate carboligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS22095 GTP diphosphokinase 0.76 PFLU_RS08870 glyoxylate carboligase low > 109
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_3508 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) 0.77 Pf1N1B4_3661 Glyoxylate carboligase (EC 4.1.1.47) low > 87
Pseudomonas simiae WCS417 0.47 PS417_20150 (p)ppGpp synthetase 0.76 PS417_08810 glyoxylate carboligase (EC 4.1.1.47) (from data)
Pseudomonas putida KT2440 0.46 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.77 PP_4297 glyoxylate carboligase low > 96
Pseudomonas stutzeri RCH2 0.46 Psest_1640 (p)ppGpp synthetase, RelA/SpoT family 0.78 Psest_1181 Glyoxylate carboligase (EC 4.1.1.47) (from data) low > 67
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS13745 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.79 ABZR87_RS03885 glyoxylate carboligase low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS15685 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.76 RPSI07_RS08650 glyoxylate carboligase low > 81
Ralstonia solanacearum GMI1000 0.36 RS_RS07930 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.77 RS_RS16440 glyoxylate carboligase low > 80
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS05265 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.79 QEN71_RS22535 glyoxylate carboligase low > 153
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS01805 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.76 RALBFv3_RS08575 glyoxylate carboligase low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS15115 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.76 UW163_RS05035 glyoxylate carboligase
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS06585 GTP pyrophosphokinase 0.79 RR42_RS19850 glyoxylate carboligase low > 128
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS13655 GTP pyrophosphokinase 0.79 BPHYT_RS08835 glyoxylate carboligase 0.30 10
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04499 GTP pyrophosphokinase 0.79 H281DRAFT_00787 tartronate-semialdehyde synthase low > 103
Acidovorax sp. GW101-3H11 0.33 Ac3H11_362 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I 0.75 Ac3H11_1086 Glyoxylate carboligase (EC 4.1.1.47) low > 79
Castellaniella sp019104865 MT123 0.33 ABCV34_RS08440 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.74 ABCV34_RS12140 glyoxylate carboligase low > 48
Variovorax sp. SCN45 0.32 GFF403 Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I 0.75 GFF1800 Glyoxylate carboligase (EC 4.1.1.47) low > 127

Not shown: 33 genomes with orthologs for MCAODC_10775 only; 6 genomes with orthologs for MCAODC_27140 only