Conservation of cofitness between JDDGAC_16085 and JDDGAC_24545 in Escherichia coli ECRC98

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_16085 dsbD protein-disulfide reductase DsbD 1.0 JDDGAC_24545 ygaV putative HTH-type transcriptional regulator YgaV 0.67 14
Escherichia coli ECRC99 1.00 KEDOAH_15715 dsbD protein-disulfide reductase DsbD 1.00 KEDOAH_07255 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC102 1.00 NIAGMN_10295 dsbD protein-disulfide reductase DsbD 1.00 NIAGMN_18650 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC100 1.00 OKFHMN_12450 dsbD protein-disulfide reductase DsbD 1.00 OKFHMN_20885 ygaV putative HTH-type transcriptional regulator YgaV low > 80
Escherichia coli ECRC62 1.00 BNILDI_06775 dsbD protein-disulfide reductase DsbD 0.98 BNILDI_11270 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Escherichia coli ECRC101 0.99 MCAODC_02960 dsbD protein-disulfide reductase DsbD 1.00 MCAODC_11405 ygaV putative HTH-type transcriptional regulator YgaV 0.68 48
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24030 protein-disulfide reductase DsbD 0.94 ECOLIN_RS14870 metalloregulator ArsR/SmtB family transcription factor — —
Escherichia coli BL21 0.99 ECD_04006 thiol:disulfide interchange protein and activator of DsbC 0.98 ECD_02523 tributyltin-inducible repressor of ygaVP low > 61
Escherichia coli BW25113 0.99 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) 0.98 b2667 ygaV predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_04399 Thiol:disulfide interchange protein DsbD 0.97 EFB2_01263 putative HTH-type transcriptional regulator YgaV low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD 0.98 OHPLBJKB_01065 putative HTH-type transcriptional regulator YgaV low > 73
Escherichia coli ECOR38 0.99 HEPCGN_10675 dsbD protein-disulfide reductase DsbD 0.98 HEPCGN_20180 ygaV putative HTH-type transcriptional regulator YgaV low > 87
Escherichia coli ECOR27 0.99 NOLOHH_04715 dsbD protein-disulfide reductase DsbD 0.98 NOLOHH_12710 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) 0.89 GFF1572 Transcriptional regulator, ArsR family low > 78
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3333 Thiol:disulfide interchange protein 0.79 EX28DRAFT_2752 Predicted transcriptional regulators low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_00416 Thiol:disulfide interchange protein DsbD 0.79 MPMX20_03547 putative HTH-type transcriptional regulator YgaV low > 85
Klebsiella michiganensis M5al 0.80 BWI76_RS02315 protein-disulfide reductase DsbD 0.71 BWI76_RS21995 transcriptional regulator low > 92
Serratia liquefaciens MT49 0.67 IAI46_01465 protein-disulfide reductase DsbD 0.33 IAI46_09640 winged helix-turn-helix transcriptional regulator low > 86
Pectobacterium carotovorum WPP14 0.65 HER17_RS18850 protein-disulfide reductase DsbD 0.42 HER17_RS03345 metalloregulator ArsR/SmtB family transcription factor low > 75
Pantoea sp. MT58 0.64 IAI47_17335 protein-disulfide reductase DsbD 0.58 IAI47_19710 helix-turn-helix transcriptional regulator low > 76
Rahnella sp. WP5 0.64 EX31_RS08975 protein-disulfide reductase DsbD 0.61 EX31_RS21725 helix-turn-helix transcriptional regulator low > 89
Dickeya dadantii 3937 0.61 DDA3937_RS02705 protein-disulfide reductase DsbD 0.30 DDA3937_RS20270 helix-turn-helix transcriptional regulator low > 74
Dickeya dianthicola ME23 0.60 DZA65_RS02835 protein-disulfide reductase DsbD 0.30 DZA65_RS01015 helix-turn-helix transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.60 HGI48_RS02680 protein-disulfide reductase DsbD 0.30 HGI48_RS00955 helix-turn-helix transcriptional regulator low > 71
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_13635 thiol:disulfide interchange protein DsbD 0.42 CSW01_17420 transcriptional regulator low > 62
Shewanella sp. ANA-3 0.44 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) 0.42 Shewana3_3141 ArsR family transcriptional regulator (RefSeq) low > 73
Shewanella loihica PV-4 0.44 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) 0.42 Shew_1095 ArsR family transcriptional regulator (RefSeq) low > 60
Shewanella oneidensis MR-1 0.43 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) 0.42 SO3538 hlyU transcriptional regulator HlyU (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.42 Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) 0.43 Sama_0920 transcriptional regulator HlyU (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.42 MIT1002_03939 Thiol:disulfide interchange protein DsbD precursor 0.27 MIT1002_02372 Biofilm growth-associated repressor — —
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_0153 Thiol:disulfide interchange protein 0.33 B158DRAFT_0345 transcriptional regulator, ArsR family — —
Dechlorosoma suillum PS 0.32 Dsui_0718 thiol:disulfide interchange protein 0.32 Dsui_1272 putative transcriptional regulator — —
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) 0.39 Pf1N1B4_4483 Transcriptional regulator, ArsR family low > 87
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) 0.40 PfGW456L13_3537 Transcriptional regulator, ArsR family low > 87
Castellaniella sp019104865 MT123 0.29 ABCV34_RS03205 protein-disulfide reductase DsbD 0.34 ABCV34_RS01430 metalloregulator ArsR/SmtB family transcription factor low > 48
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS19110 thiol:disulfide interchange protein 0.28 RR42_RS35445 ArsR family transcriptional regulator — —
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_05598 thiol:disulfide interchange protein DsbD 0.33 H281DRAFT_02691 transcriptional regulator, ArsR family — —
Pseudomonas stutzeri RCH2 0.28 Psest_1603 Thiol:disulfide interchange protein 0.36 Psest_1782 Predicted transcriptional regulators low > 67
Pseudomonas simiae WCS417 0.27 PS417_19525 thiol:disulfide interchange protein 0.38 PS417_17530 ArsR family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_19365 thiol:disulfide interchange protein 0.39 AO353_26620 ArsR family transcriptional regulator low > 101
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS11500 protein-disulfide reductase DsbD 0.48 A4249_RS00235 metalloregulator ArsR/SmtB family transcription factor low > 48

Not shown: 20 genomes with orthologs for JDDGAC_16085 only; 15 genomes with orthologs for JDDGAC_24545 only