Conservation of cofitness between JDDGAC_13585 and JDDGAC_18035 in Escherichia coli ECRC98

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_13585 ubiE SAM-dependent methyltransferase 1.0 JDDGAC_18035 uvrD DNA helicase II 0.59 17
Escherichia coli ECRC101 1.00 MCAODC_00505 ubiE SAM-dependent methyltransferase 1.00 MCAODC_04915 uvrD DNA helicase II low > 87
Escherichia coli ECRC99 1.00 KEDOAH_18165 ubiE SAM-dependent methyltransferase 1.00 KEDOAH_13740 uvrD DNA helicase II — —
Escherichia coli ECRC102 1.00 NIAGMN_07840 ubiE SAM-dependent methyltransferase 1.00 NIAGMN_12165 uvrD DNA helicase II — —
Escherichia coli ECRC100 1.00 OKFHMN_09990 ubiE SAM-dependent methyltransferase 1.00 OKFHMN_14410 uvrD DNA helicase II low > 80
Escherichia coli ECOR27 0.96 NOLOHH_02335 ubiE SAM-dependent methyltransferase 1.00 NOLOHH_06540 uvrD DNA helicase II 0.61 50
Escherichia coli HS(pFamp)R (ATCC 700891) 0.96 OHPLBJKB_03451 putative methyltransferase YcgJ 1.00 OHPLBJKB_04237 DNA helicase II low > 73
Escherichia coli ECOR38 0.96 HEPCGN_07930 ubiE SAM-dependent methyltransferase 1.00 HEPCGN_13115 uvrD DNA helicase II low > 87
Escherichia coli ECRC62 0.95 BNILDI_09335 ubiE SAM-dependent methyltransferase 1.00 BNILDI_04995 uvrD DNA helicase II low > 75
Escherichia fergusonii Becca 0.94 EFB2_03833 putative methyltransferase YcgJ 1.00 EFB2_04824 DNA helicase II low > 86
Escherichia coli Nissle 1917 0.94 ECOLIN_RS01150 class I SAM-dependent methyltransferase 1.00 ECOLIN_RS21885 DNA helicase II low > 55
Klebsiella michiganensis M5al 0.78 BWI76_RS05430 UbiE/COQ5 family methyltransferase 0.98 BWI76_RS01220 DNA-dependent helicase II low > 92
Enterobacter asburiae PDN3 0.75 EX28DRAFT_2684 Methyltransferase domain 0.97 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF4042 SAM-dependent methyltransferase YafE (UbiE paralog) 0.99 GFF241 ATP-dependent DNA helicase UvrD/PcrA low > 78
Enterobacter sp. TBS_079 0.74 MPMX20_00895 putative methyltransferase YcgJ 0.97 MPMX20_04463 DNA helicase II low > 85
Escherichia coli BL21 0.74 ECD_00203 putative S-adenosyl-L-methionine-dependent methyltransferase 1.00 ECD_03689 DNA-dependent ATPase I and helicase II — —
Escherichia coli BW25113 0.74 b0210 yafE predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) 1.00 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) low > 76
Rahnella sp. WP5 0.62 EX31_RS21940 class I SAM-dependent methyltransferase 0.87 EX31_RS15175 DNA helicase II low > 89
Serratia liquefaciens MT49 0.62 IAI46_04605 class I SAM-dependent methyltransferase 0.90 IAI46_00735 DNA helicase II low > 86
Pectobacterium carotovorum WPP14 0.60 HER17_RS04660 SAM-dependent methyltransferase 0.91 HER17_RS01360 DNA helicase II low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS10700 class I SAM-dependent methyltransferase 0.89 DDA3937_RS19880 DNA helicase II low > 74
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_13 SAM-dependent methyltransferase YafE (UbiE paralog) 0.61 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA low > 87
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_20630 SAM-dependent methyltransferase 0.62 AO353_10055 DNA helicase II low > 101
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3946 SAM-dependent methyltransferase YafE (UbiE paralog) 0.62 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA low > 87
Pseudomonas putida KT2440 0.53 PP_1987 Methlytransferase, UbiE/COQ5 family 0.62 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex low > 96
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_21410 SAM-dependent methyltransferase 0.62 AO356_11990 DNA helicase II low > 104
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_65 SAM-dependent methyltransferase YafE (UbiE paralog) 0.62 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA low > 103
Pseudomonas sp. RS175 0.52 PFR28_02822 putative methyltransferase YcgJ 0.62 PFR28_04523 DNA helicase II low > 88
Pseudomonas fluorescens SBW25 0.52 PFLU_RS20570 class I SAM-dependent methyltransferase 0.62 PFLU_RS29900 DNA helicase II low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS20570 class I SAM-dependent methyltransferase 0.62 PFLU_RS29900 DNA helicase II low > 109
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS24960 class I SAM-dependent methyltransferase 0.43 QEN71_RS05110 3'-5' exonuclease — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00196 Ubiquinone/menaquinone biosynthesis C-methylase UbiE 0.44 H281DRAFT_04469 ATP-dependent DNA helicase UvrD — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS05220 S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB 0.44 BPHYT_RS13840 DNA-dependent helicase — —
Paraburkholderia graminis OAS925 0.48 ABIE53_001313 SAM-dependent methyltransferase 0.44 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA — —
Magnetospirillum magneticum AMB-1 0.46 AMB_RS01600 class I SAM-dependent methyltransferase 0.35 AMB_RS03725 DNA helicase II low > 64
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS08170 S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB 0.43 HSERO_RS02160 DNA-dependent helicase low > 78
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1052.1 hypothetical protein 0.57 Xcc-8004.5114.1 ATP-dependent DNA helicase UvrD/PcrA low > 74
Azospirillum brasilense Sp245 0.45 AZOBR_RS21750 S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB 0.36 AZOBR_RS12445 DNA helicase II low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_01135 putative methyltransferase YcgJ 0.36 MPMX19_01610 ATP-dependent DNA helicase PcrA low > 112
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS03430 SAM-dependent methyltransferase 0.42 RR42_RS15090 DNA helicase low > 128
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS17180 class I SAM-dependent methyltransferase 0.42 ABZR87_RS15705 UvrD-helicase domain-containing protein low > 80

Not shown: 1 genomes with orthologs for JDDGAC_13585 only; 51 genomes with orthologs for JDDGAC_18035 only