Conservation of cofitness between JDDGAC_10725 and JDDGAC_00660 in Escherichia coli ECRC98

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_10725 kdpD two-component system sensor histidine kinase KdpD 1.0 JDDGAC_00660 otsB trehalose-phosphatase 0.56 16
Escherichia coli ECRC100 1.00 OKFHMN_07075 kdpD two-component system sensor histidine kinase KdpD 1.00 OKFHMN_26085 otsB trehalose-phosphatase low > 80
Escherichia coli ECRC99 1.00 KEDOAH_20895 kdpD two-component system sensor histidine kinase KdpD 1.00 KEDOAH_02020 otsB trehalose-phosphatase — —
Escherichia coli ECRC102 1.00 NIAGMN_05130 kdpD two-component system sensor histidine kinase KdpD 1.00 NIAGMN_01975 otsB trehalose-phosphatase — —
Escherichia coli ECRC101 1.00 MCAODC_26290 kdpD two-component system sensor histidine kinase KdpD 1.00 MCAODC_19320 otsB trehalose-phosphatase low > 87
Escherichia coli BL21 1.00 ECD_00652 fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein 0.99 ECD_01866 trehalose-6-phosphate phosphatase, biosynthetic low > 61
Escherichia coli ECOR27 1.00 NOLOHH_23455 kdpD two-component system sensor histidine kinase KdpD 1.00 NOLOHH_16525 otsB trehalose-phosphatase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03022 Sensor protein KdpD 0.99 OHPLBJKB_01831 Trehalose-6-phosphate phosphatase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_01160 kdpD two-component system sensor histidine kinase KdpD 0.99 HEPCGN_04505 otsB trehalose-phosphatase low > 87
Escherichia coli ECRC62 1.00 BNILDI_21460 kdpD two-component system sensor histidine kinase KdpD 0.99 BNILDI_15315 otsB trehalose-phosphatase low > 75
Escherichia coli BW25113 0.99 b0695 kdpD fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein (NCBI) 0.99 b1897 otsB trehalose-6-phosphate phosphatase, biosynthetic (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03755 two-component system sensor histidine kinase KdpD 0.98 ECOLIN_RS10815 trehalose-phosphatase — —
Escherichia fergusonii Becca 0.99 EFB2_03401 Sensor protein KdpD 0.98 EFB2_02048 Trehalose-6-phosphate phosphatase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF4607 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.74 GFF1676 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) low > 78
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2283 Osmosensitive K+ channel histidine kinase 0.59 EX28DRAFT_0655 trehalose-phosphatase low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01338 Sensor protein KdpD 0.58 MPMX20_02805 Trehalose-6-phosphate phosphatase low > 85
Klebsiella michiganensis M5al 0.83 BWI76_RS08305 two-component sensor histidine kinase 0.62 BWI76_RS18235 trehalose-phosphatase low > 92
Rahnella sp. WP5 0.68 EX31_RS23335 two-component system sensor histidine kinase KdbD 0.48 EX31_RS01305 trehalose-phosphatase low > 89
Pantoea sp. MT58 0.66 IAI47_01250 two-component system sensor histidine kinase KdbD 0.48 IAI47_08270 trehalose-phosphatase low > 76
Erwinia tracheiphila SCR3 0.65 LU632_RS00800 kdpD two-component system sensor histidine kinase KdpD 0.45 LU632_RS13595 otsB trehalose-phosphatase low > 74
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS24345 DUF4118 domain-containing protein 0.35 QEN71_RS04710 trehalose-phosphatase low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS06460 histidine kinase 0.35 BPHYT_RS14265 trehalose-phosphatase — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04532 two-component system, OmpR family, sensor histidine kinase KdpD 0.37 H281DRAFT_04388 trehalose 6-phosphatase (EC 3.1.3.12) low > 103
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS00495 histidine kinase 0.31 RR42_RS02320 trehalose phosphatase low > 128
Paraburkholderia graminis OAS925 0.41 ABIE53_001556 two-component system sensor histidine kinase KdpD 0.36 ABIE53_003017 trehalose 6-phosphate phosphatase 0.31 9
Ralstonia solanacearum PSI07 0.40 RPSI07_RS08140 sensor histidine kinase KdpD 0.36 RPSI07_RS05130 trehalose-phosphatase low > 81
Ralstonia solanacearum GMI1000 0.40 RS_RS16960 sensor histidine kinase KdpD 0.34 RS_RS22445 trehalose-phosphatase low > 80
Variovorax sp. SCN45 0.40 GFF3520 Osmosensitive K+ channel histidine kinase KdpD 0.31 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) low > 127
Ralstonia solanacearum UW163 0.40 UW163_RS04465 sensor histidine kinase KdpD 0.36 UW163_RS20705 trehalose-phosphatase — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS09130 sensor histidine kinase KdpD 0.36 RALBFv3_RS18425 trehalose-phosphatase — —
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS18855 sensor protein KdpD 0.33 HSERO_RS00965 trehalose-phosphatase low > 78
Variovorax sp. OAS795 0.39 ABID97_RS01010 DUF4118 domain-containing protein 0.33 ABID97_RS06575 trehalose-phosphatase low > 91
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS04525 sensor histidine kinase KdpD 0.35 ABZR87_RS19435 trehalose-phosphatase low > 80
Rhizobium sp. OAE497 0.33 ABIE40_RS24610 sensor histidine kinase KdpD 0.28 ABIE40_RS01470 trehalose-phosphatase low > 107
Azospirillum brasilense Sp245 0.33 AZOBR_RS23975 histidine kinase 0.12 AZOBR_RS11670 trehalose-6-phosphate phosphatase — —
Azospirillum sp. SherDot2 0.31 MPMX19_03748 Sensor protein KdpD 0.15 MPMX19_00346 Trehalose-phosphate phosphatase low > 112
Rhodopseudomonas palustris CGA009 0.31 TX73_015550 sensor histidine kinase KdpD 0.26 TX73_024230 trehalose-phosphatase low > 86
Bosea sp. OAE506 0.30 ABIE41_RS24230 sensor histidine kinase KdpD 0.28 ABIE41_RS23830 trehalose-phosphatase low > 77
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS13210 sensor histidine kinase KdpD 0.29 ABZR86_RS10945 trehalose-phosphatase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF4474 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.30 GFF1622 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) 0.47 12
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.4379.1 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.28 Xcc-8004.1372.1 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS15630 sensor histidine kinase KdpD 0.27 A4249_RS12295 trehalose-phosphatase low > 48
Acinetobacter radioresistens SK82 0.23 MPMX26_02241 Sensor protein KdpD 0.27 MPMX26_02457 Trehalose-6-phosphate phosphatase — —

Not shown: 28 genomes with orthologs for JDDGAC_10725 only; 2 genomes with orthologs for JDDGAC_00660 only