Conservation of cofitness between IAI46_03280 and IAI46_00015 in Serratia liquefaciens MT49

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03280 DNA polymerase II 1.0 IAI46_00015 DNA replication/repair protein RecF 0.81 6
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.39 Psyr_0003 DNA replication and repair protein RecF low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.39 Psyr_0003 DNA replication and repair protein RecF low > 86
Pseudomonas sp. RS175 0.77 PFR28_01299 DNA polymerase II 0.39 PFR28_04593 DNA replication and repair protein RecF low > 88
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_2137 DNA polymerase II (EC 2.7.7.7) 0.38 Pf6N2E2_4197 DNA recombination and repair protein RecF 0.22 22
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_87 DNA polymerase II (EC 2.7.7.7) 0.38 Pf1N1B4_1927 DNA recombination and repair protein RecF 0.30 40
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2472 DNA polymerase II (EC 2.7.7.7) 0.37 PfGW456L13_664 DNA recombination and repair protein RecF low > 87
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_29350 DNA polymerase II 0.38 AO353_10480 recombinase RecF 0.54 10
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_01325 DNA polymerase II 0.39 AO356_11635 recombinase RecF 0.50 3
Rahnella sp. WP5 0.77 EX31_RS03740 DNA polymerase II 0.92 EX31_RS05975 DNA replication/repair protein RecF low > 89
Pseudomonas stutzeri RCH2 0.76 Psest_1519 DNA polymerase elongation subunit (family B) 0.36 Psest_0004 recF protein 0.37 1
Pectobacterium carotovorum WPP14 0.75 HER17_RS02995 DNA polymerase II 0.90 HER17_RS00015 DNA replication/repair protein RecF low > 75
Pseudomonas simiae WCS417 0.74 PS417_09565 DNA polymerase II 0.37 PS417_00015 recombinase RecF 0.19 58
Pseudomonas sp. S08-1 0.74 OH686_16850 DNA polymerase II 0.38 OH686_12620 DNA recombination and repair protein RecF low > 80
Pseudomonas fluorescens SBW25 0.73 PFLU_RS10185 DNA polymerase II 0.38 PFLU_RS00015 DNA replication/repair protein RecF low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS10185 DNA polymerase II 0.38 PFLU_RS00015 DNA replication/repair protein RecF low > 109
Dickeya dianthicola 67-19 0.73 HGI48_RS18165 DNA polymerase II 0.87 HGI48_RS00015 DNA replication/repair protein RecF low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS19305 DNA polymerase II 0.87 DZA65_RS00015 DNA replication/repair protein RecF low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS18230 DNA polymerase II 0.87 DDA3937_RS21285 DNA replication/repair protein RecF low > 74
Pseudomonas putida KT2440 0.73 PP_2393 DNA polymerase II 0.38 PP_0012 DNA replication and repair protein low > 96
Erwinia tracheiphila SCR3 0.72 LU632_RS02810 polB DNA polymerase II 0.88 LU632_RS00015 recF DNA replication/repair protein RecF low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF182 DNA polymerase II (EC 2.7.7.7) 0.84 GFF1756 DNA recombination and repair protein RecF low > 78
Pantoea sp. MT58 0.71 IAI47_16050 DNA polymerase II 0.89 IAI47_00015 DNA replication/repair protein RecF low > 76
Escherichia coli BL21 0.71 ECD_00062 DNA polymerase II 0.84 ECD_03583 gap repair protein low > 60
Escherichia coli ECOR38 0.71 HEPCGN_08785 polB DNA polymerase II 0.83 HEPCGN_13720 recF DNA replication/repair protein RecF low > 85
Escherichia coli BW25113 0.71 b0060 polB DNA polymerase II (NCBI) 0.84 b3700 recF recombination protein F (NCBI) 0.58 3
Enterobacter sp. TBS_079 0.71 MPMX20_00754 DNA polymerase II 0.83 MPMX20_00003 DNA replication and repair protein RecF low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03598 DNA polymerase II 0.84 OHPLBJKB_00003 DNA replication and repair protein RecF low > 73
Escherichia coli ECRC101 0.71 OKFHMN_10795 polB DNA polymerase II 0.84 OKFHMN_15025 recF DNA replication/repair protein RecF — —
Escherichia coli ECRC98 0.71 JDDGAC_14390 polB DNA polymerase II 0.84 JDDGAC_18645 recF DNA replication/repair protein RecF — —
Escherichia coli ECRC101 0.71 MCAODC_01310 polB DNA polymerase II 0.84 MCAODC_05535 recF DNA replication/repair protein RecF — —
Escherichia coli ECRC99 0.71 KEDOAH_17360 polB DNA polymerase II 0.84 KEDOAH_13125 recF DNA replication/repair protein RecF — —
Escherichia fergusonii Becca 0.71 EFB2_03985 DNA polymerase II 0.84 EFB2_00003 DNA replication and repair protein RecF low > 86
Escherichia coli ECRC102 0.71 NIAGMN_08645 polB DNA polymerase II 0.84 NIAGMN_12780 recF DNA replication/repair protein RecF — —
Escherichia coli ECRC62 0.71 BNILDI_08465 polB DNA polymerase II 0.84 BNILDI_04365 recF DNA replication/repair protein RecF — —
Escherichia coli ECOR27 0.71 NOLOHH_03140 polB DNA polymerase II 0.84 NOLOHH_07165 recF DNA replication/repair protein RecF low > 57
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00320 DNA polymerase II 0.84 ECOLIN_RS21310 DNA replication/repair protein RecF low > 52
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) 0.84 EX28DRAFT_3987 DNA replication and repair protein RecF low > 76
Klebsiella michiganensis M5al 0.69 BWI76_RS04575 DNA polymerase II 0.84 BWI76_RS00010 DNA replication and repair protein RecF low > 92
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_06130 DNA polymerase II 0.57 CSW01_00065 DNA replication and repair protein RecF low > 62
Alteromonas macleodii MIT1002 0.40 MIT1002_03358 DNA polymerase II 0.33 MIT1002_00003 DNA replication and repair protein RecF low > 70
Shewanella loihica PV-4 0.39 Shew_2482 DNA polymerase II (RefSeq) 0.47 Shew_0003 DNA replication and repair protein RecF (RefSeq) 0.71 11
Shewanella sp. ANA-3 0.39 Shewana3_2629 DNA polymerase II (RefSeq) 0.47 Shewana3_0011 recF recombination protein F (RefSeq) low > 73
Shewanella amazonensis SB2B 0.39 Sama_1250 DNA polymerase II (RefSeq) 0.44 Sama_0015 recF recombination protein F (RefSeq) 0.63 5
Shewanella oneidensis MR-1 0.38 SO1820 polB DNA polymerase II (NCBI ptt file) 0.47 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) 0.25 57

Not shown: 9 genomes with orthologs for IAI46_03280 only; 38 genomes with orthologs for IAI46_00015 only