Conservation of cofitness between HSERO_RS22470 and HSERO_RS22460 in Herbaspirillum seropedicae SmR1

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22470 D-xylose ABC transporter permease 1.0 HSERO_RS22460 xylose ABC transporter substrate-binding protein 0.88 3
Pseudomonas simiae WCS417 0.74 PS417_10930 D-xylose ABC transporter permease 0.78 PS417_10940 sugar ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens SBW25 0.72 PFLU_RS11290 sugar ABC transporter permease 0.78 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS11290 sugar ABC transporter permease 0.78 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein low > 109
Pseudomonas sp. RS175 0.71 PFR28_02351 Xylose transport system permease protein XylH 0.79 PFR28_02349 D-xylose-binding periplasmic protein 0.52 5
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_1457 Xylose ABC transporter, permease protein XylH 0.79 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF low > 103
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_2886 xylose ABC transporter membrane protein 0.79 Psyr_2884 xylose-binding protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_28515 sugar ABC transporter permease 0.79 AO356_28505 sugar ABC transporter substrate-binding protein 0.36 5
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_2886 xylose ABC transporter membrane protein 0.79 Psyr_2884 xylose-binding protein low > 86
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS25860 sugar ABC transporter permease 0.75 QEN71_RS25870 D-xylose ABC transporter substrate-binding protein 0.94 2
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_03879 xylose ABC transporter membrane protein 0.76 H281DRAFT_03877 xylose-binding protein low > 103
Paraburkholderia graminis OAS925 0.64 ABIE53_004932 D-xylose transport system permease protein 0.76 ABIE53_004930 D-xylose transport system substrate-binding protein 0.39 82
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS32810 xylose ABC transporter permease 0.76 BPHYT_RS32820 xylose ABC transporter substrate-binding protein low > 109
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS18230 sugar ABC transporter permease 0.77 ABZR87_RS18220 D-xylose ABC transporter substrate-binding protein 0.53 3
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS14410 sugar ABC transporter permease 0.68 ABZR86_RS14420 D-xylose ABC transporter substrate-binding protein low > 74
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS23495 sugar ABC transporter permease 0.63 RALBFv3_RS23505 D-xylose ABC transporter substrate-binding protein — —
Ralstonia solanacearum UW163 0.51 UW163_RS16745 sugar ABC transporter permease 0.63 UW163_RS16755 D-xylose ABC transporter substrate-binding protein — —
Serratia liquefaciens MT49 0.51 IAI46_00295 sugar ABC transporter permease 0.60 IAI46_00285 D-xylose ABC transporter substrate-binding protein low > 86
Ralstonia solanacearum PSI07 0.50 RPSI07_RS07645 sugar ABC transporter permease 0.63 RPSI07_RS07635 D-xylose ABC transporter substrate-binding protein 0.65 1
Rahnella sp. WP5 0.50 EX31_RS09750 sugar ABC transporter permease 0.58 EX31_RS09760 D-xylose ABC transporter substrate-binding protein low > 89
Ralstonia solanacearum GMI1000 0.49 RS_RS24955 sugar ABC transporter permease 0.66 RS_RS24945 D-xylose ABC transporter substrate-binding protein 0.86 2
Pectobacterium carotovorum WPP14 0.49 HER17_RS21070 sugar ABC transporter permease 0.58 HER17_RS21080 D-xylose ABC transporter substrate-binding protein low > 75
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3833 ABC-type xylose transport system, permease component 0.60 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein low > 76
Pantoea sp. MT58 0.48 IAI47_00180 sugar ABC transporter permease 0.62 IAI47_00190 D-xylose ABC transporter substrate-binding protein low > 76
Dickeya dadantii 3937 0.48 DDA3937_RS20920 sugar ABC transporter permease 0.59 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein low > 74
Dickeya dianthicola 67-19 0.48 HGI48_RS00325 sugar ABC transporter permease 0.59 HGI48_RS00315 D-xylose ABC transporter substrate-binding protein low > 71
Dickeya dianthicola ME23 0.48 DZA65_RS00325 sugar ABC transporter permease 0.59 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein low > 75
Enterobacter sp. TBS_079 0.48 MPMX20_00162 Xylose transport system permease protein XylH 0.60 MPMX20_00164 D-xylose-binding periplasmic protein 0.47 4
Klebsiella michiganensis M5al 0.47 BWI76_RS27040 xylose ABC transporter permease 0.61 BWI76_RS27030 D-xylose transporter subunit XylF low > 92
Escherichia coli ECRC101 0.46 MCAODC_06455 xylH xylose ABC transporter permease XylH 0.59 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein low > 87
Escherichia coli ECRC98 0.46 JDDGAC_19570 xylH xylose ABC transporter permease XylH 0.59 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein low > 86
Escherichia coli BW25113 0.46 b3568 xylH D-xylose transporter subunit (NCBI) 0.59 b3566 xylF D-xylose transporter subunit (NCBI) low > 76
Escherichia coli ECOR38 0.46 HEPCGN_14825 xylH xylose ABC transporter permease XylH 0.60 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein low > 87
Escherichia coli ECRC100 0.46 OKFHMN_15940 xylH xylose ABC transporter permease XylH 0.59 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00136 Xylose transport system permease protein XylH 0.60 OHPLBJKB_00138 D-xylose-binding periplasmic protein low > 73
Escherichia coli ECRC102 0.46 NIAGMN_13700 xylH xylose ABC transporter permease XylH 0.59 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein — —
Escherichia coli ECRC62 0.46 BNILDI_03660 xylH xylose ABC transporter permease XylH 0.60 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein low > 75
Escherichia coli BL21 0.46 ECD_03420 D-xylose ABC transporter permease 0.60 ECD_03418 D-xylose transporter subunit low > 61
Escherichia coli ECOR27 0.46 NOLOHH_07885 xylH xylose ABC transporter permease XylH 0.60 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein low > 75
Escherichia coli Nissle 1917 0.46 ECOLIN_RS20405 xylose ABC transporter permease XylH 0.60 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein low > 55
Escherichia coli ECRC99 0.46 KEDOAH_12210 xylH xylose ABC transporter permease XylH 0.59 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein — —
Escherichia fergusonii Becca 0.46 EFB2_00239 Xylose transport system permease protein XylH 0.60 EFB2_00241 D-xylose-binding periplasmic protein low > 86

Not shown: 0 genomes with orthologs for HSERO_RS22470 only; 8 genomes with orthologs for HSERO_RS22460 only