Conservation of cofitness between HSERO_RS22465 and HSERO_RS22460 in Herbaspirillum seropedicae SmR1

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22465 sugar ABC transporter 1.0 HSERO_RS22460 xylose ABC transporter substrate-binding protein 0.94 2
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_28510 xylose transporter 0.79 AO356_28505 sugar ABC transporter substrate-binding protein 0.44 5
Pseudomonas simiae WCS417 0.79 PS417_10935 xylose transporter 0.78 PS417_10940 sugar ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS11295 D-xylose ABC transporter ATP-binding protein 0.78 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.78 PFLU_RS11295 D-xylose ABC transporter ATP-binding protein 0.78 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_1456 D-xylose transport ATP-binding protein XylG 0.79 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF low > 103
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_2885 xylose ABC transporter ATP-binding protein 0.79 Psyr_2884 xylose-binding protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_2885 xylose ABC transporter ATP-binding protein 0.79 Psyr_2884 xylose-binding protein low > 86
Pseudomonas sp. RS175 0.78 PFR28_02350 Xylose import ATP-binding protein XylG 0.79 PFR28_02349 D-xylose-binding periplasmic protein 0.61 4
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_03878 xylose ABC transporter ATP-binding protein 0.76 H281DRAFT_03877 xylose-binding protein low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_004931 D-xylose transport system ATP-binding protein 0.76 ABIE53_004930 D-xylose transport system substrate-binding protein 0.26 10
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS18225 D-xylose ABC transporter ATP-binding protein 0.77 ABZR87_RS18220 D-xylose ABC transporter substrate-binding protein 0.70 2
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS32815 sugar ABC transporter 0.76 BPHYT_RS32820 xylose ABC transporter substrate-binding protein low > 109
Ralstonia solanacearum GMI1000 0.71 RS_RS24950 D-xylose ABC transporter ATP-binding protein 0.66 RS_RS24945 D-xylose ABC transporter substrate-binding protein 0.91 2
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS23500 xylose ABC transporter ATP-binding protein 0.63 RALBFv3_RS23505 D-xylose ABC transporter substrate-binding protein — —
Ralstonia solanacearum UW163 0.71 UW163_RS16750 xylose ABC transporter ATP-binding protein 0.63 UW163_RS16755 D-xylose ABC transporter substrate-binding protein — —
Ralstonia solanacearum PSI07 0.71 RPSI07_RS07640 xylose ABC transporter ATP-binding protein 0.63 RPSI07_RS07635 D-xylose ABC transporter substrate-binding protein 0.50 7
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS25865 D-xylose ABC transporter ATP-binding protein 0.75 QEN71_RS25870 D-xylose ABC transporter substrate-binding protein 0.94 2
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS14415 D-xylose ABC transporter ATP-binding protein 0.68 ABZR86_RS14420 D-xylose ABC transporter substrate-binding protein low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00137 Xylose import ATP-binding protein XylG 0.60 OHPLBJKB_00138 D-xylose-binding periplasmic protein low > 73
Escherichia coli ECRC100 0.53 OKFHMN_15945 xylG D-xylose ABC transporter ATP-binding protein 0.59 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein low > 80
Escherichia coli ECRC101 0.53 MCAODC_06460 xylG D-xylose ABC transporter ATP-binding protein 0.59 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein low > 87
Escherichia coli ECRC62 0.53 BNILDI_03655 xylG D-xylose ABC transporter ATP-binding protein 0.60 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein low > 75
Escherichia coli ECOR38 0.53 HEPCGN_14830 xylG D-xylose ABC transporter ATP-binding protein 0.60 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein low > 87
Escherichia coli ECRC102 0.53 NIAGMN_13705 xylG D-xylose ABC transporter ATP-binding protein 0.59 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein — —
Escherichia coli ECRC98 0.53 JDDGAC_19575 xylG D-xylose ABC transporter ATP-binding protein 0.59 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein low > 86
Escherichia coli ECRC99 0.53 KEDOAH_12205 xylG D-xylose ABC transporter ATP-binding protein 0.59 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein — —
Escherichia coli BW25113 0.53 b3567 xylG fused D-xylose transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.59 b3566 xylF D-xylose transporter subunit (NCBI) 0.58 2
Escherichia coli ECOR27 0.53 NOLOHH_07890 xylG D-xylose ABC transporter ATP-binding protein 0.60 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein low > 75
Escherichia coli Nissle 1917 0.53 ECOLIN_RS20400 D-xylose ABC transporter ATP-binding protein 0.60 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein low > 55
Escherichia fergusonii Becca 0.53 EFB2_00240 Xylose import ATP-binding protein XylG 0.60 EFB2_00241 D-xylose-binding periplasmic protein low > 86
Enterobacter asburiae PDN3 0.53 EX28DRAFT_3832 D-xylose ABC transporter, ATP-binding protein 0.60 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein low > 76
Klebsiella michiganensis M5al 0.53 BWI76_RS27035 xylose ABC transporter ATP-binding protein 0.61 BWI76_RS27030 D-xylose transporter subunit XylF low > 92
Enterobacter sp. TBS_079 0.53 MPMX20_00163 Xylose import ATP-binding protein XylG 0.60 MPMX20_00164 D-xylose-binding periplasmic protein 0.66 4
Pantoea sp. MT58 0.52 IAI47_00185 xylose ABC transporter ATP-binding protein 0.62 IAI47_00190 D-xylose ABC transporter substrate-binding protein low > 76
Dickeya dianthicola ME23 0.52 DZA65_RS00320 xylose ABC transporter ATP-binding protein 0.59 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS00320 xylose ABC transporter ATP-binding protein 0.59 HGI48_RS00315 D-xylose ABC transporter substrate-binding protein low > 71
Dickeya dadantii 3937 0.51 DDA3937_RS20925 xylose ABC transporter ATP-binding protein 0.59 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein low > 74
Pectobacterium carotovorum WPP14 0.51 HER17_RS21075 xylose ABC transporter ATP-binding protein 0.58 HER17_RS21080 D-xylose ABC transporter substrate-binding protein low > 75
Serratia liquefaciens MT49 0.51 IAI46_00290 xylose ABC transporter ATP-binding protein 0.60 IAI46_00285 D-xylose ABC transporter substrate-binding protein low > 86
Rahnella sp. WP5 0.47 EX31_RS09755 xylose ABC transporter ATP-binding protein 0.58 EX31_RS09760 D-xylose ABC transporter substrate-binding protein low > 89

Not shown: 0 genomes with orthologs for HSERO_RS22465 only; 9 genomes with orthologs for HSERO_RS22460 only