Conservation of cofitness between HSERO_RS15940 and HSERO_RS21110 in Herbaspirillum seropedicae SmR1

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS15940 peptide ABC transporter substrate-binding protein 1.0 HSERO_RS21110 dTDP-glucose 4,6-dehydratase 0.46 4
Ralstonia solanacearum PSI07 0.71 RPSI07_RS03260 ABC transporter ATP-binding protein 0.39 RPSI07_RS04445 polysaccharide biosynthesis protein low > 81
Dickeya dianthicola ME23 0.66 DZA65_RS02330 ABC transporter ATP-binding protein 0.41 DZA65_RS03625 polysaccharide biosynthesis protein low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS02195 ABC transporter ATP-binding protein 0.41 HGI48_RS03510 polysaccharide biosynthesis protein low > 71
Dickeya dadantii 3937 0.66 DDA3937_RS02240 ATP-binding cassette domain-containing protein 0.41 DDA3937_RS03410 polysaccharide biosynthesis protein low > 74
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_1812 peptide ABC transporter, ATP-binding protein 0.45 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Pseudomonas sp. RS175 0.61 PFR28_00049 Oligopeptide transport ATP-binding protein OppD 0.46 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_2264 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 0.45 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_2264 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 0.45 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_29385 peptide ABC transporter substrate-binding protein 0.46 AO356_03345 hypothetical protein low > 104
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2675 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 0.44 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases low > 76
Variovorax sp. OAS795 0.45 ABID97_RS04460 ABC transporter ATP-binding protein 0.45 ABID97_RS02200 nucleoside-diphosphate sugar epimerase/dehydratase low > 91
Rhodopseudomonas palustris CGA009 0.45 TX73_007420 ABC transporter ATP-binding protein 0.21 TX73_020640 nucleoside-diphosphate sugar epimerase/dehydratase low > 86
Azospirillum sp. SherDot2 0.44 MPMX19_04416 Dipeptide transport ATP-binding protein DppD 0.26 MPMX19_01807 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS31475 ABC transporter ATP-binding protein 0.32 QEN71_RS25590 nucleoside-diphosphate sugar epimerase/dehydratase low > 153
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS11230 peptide ABC transporter ATP-binding protein 0.43 RR42_RS15825 capsular biosynthesis protein low > 128
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_01032 peptide/nickel transport system ATP-binding protein 0.33 H281DRAFT_04851 NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC low > 103
Acidovorax sp. GW101-3H11 0.43 Ac3H11_4825 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) 0.29 Ac3H11_1539 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 79
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_05560 ABC transporter ATP-binding protein 0.40 CSW01_01350 polysaccharide biosynthesis protein low > 62
Rhodospirillum rubrum S1H 0.42 Rru_A0589 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) 0.25 Rru_A3656 Polysaccharide biosynthesis protein CapD (NCBI)
Bosea sp. OAE506 0.41 ABIE41_RS02275 ABC transporter ATP-binding protein 0.19 ABIE41_RS03855 nucleoside-diphosphate sugar epimerase/dehydratase
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS18675 peptide ABC transporter ATP-binding protein 0.33 BPHYT_RS04385 nucleoside-diphosphate sugar oxidoreductase low > 109
Pseudomonas putida KT2440 0.40 PP_0879 dipeptide ABC transporter - putative ATP binding subunit 0.46 PP_1805 Polysaccharide biosynthesis protein low > 96
Dinoroseobacter shibae DFL-12 0.40 Dshi_3796 oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) 0.32 Dshi_3857 polysaccharide biosynthesis protein CapD (RefSeq) low > 64
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_05405 peptide ABC transporter ATP-binding protein 0.46 AO353_01970 hypothetical protein low > 101
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_5057 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) 0.46 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Pseudomonas simiae WCS417 0.39 PS417_04050 peptide ABC transporter ATP-binding protein 0.45 PS417_08190 membrane protein low > 88
Pseudomonas fluorescens SBW25 0.39 PFLU_RS04090 ABC transporter ATP-binding protein 0.45 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Castellaniella sp019104865 MT123 0.39 ABCV34_RS11095 ABC transporter ATP-binding protein 0.29 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase low > 48
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS04090 ABC transporter ATP-binding protein 0.45 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas sp. S08-1 0.39 OH686_08715 Dipeptide ABC transporter, ATP-binding protein DppD 0.47 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM low > 80
Shewanella oneidensis MR-1 0.31 SO1802 sapD peptide ABC transporter, ATP-binding protein (NCBI ptt file) 0.47 SO3171 polysaccharide biosynthesis protein (NCBI ptt file)
Shewanella amazonensis SB2B 0.30 Sama_1232 peptide ABC transporter, ATP-binding protein (RefSeq) 0.49 Sama_2244 polysaccharide biosynthesis protein (RefSeq) low > 62

Not shown: 25 genomes with orthologs for HSERO_RS15940 only; 27 genomes with orthologs for HSERO_RS21110 only