Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS15940 | | peptide ABC transporter substrate-binding protein | 1.0 | HSERO_RS21110 | | dTDP-glucose 4,6-dehydratase | 0.46 | 4 |
Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS03260 | | ABC transporter ATP-binding protein | 0.39 | RPSI07_RS04445 | | polysaccharide biosynthesis protein | low | > 81 |
Dickeya dianthicola ME23 | 0.66 | DZA65_RS02330 | | ABC transporter ATP-binding protein | 0.41 | DZA65_RS03625 | | polysaccharide biosynthesis protein | low | > 75 |
Dickeya dianthicola 67-19 | 0.66 | HGI48_RS02195 | | ABC transporter ATP-binding protein | 0.41 | HGI48_RS03510 | | polysaccharide biosynthesis protein | low | > 71 |
Dickeya dadantii 3937 | 0.66 | DDA3937_RS02240 | | ATP-binding cassette domain-containing protein | 0.41 | DDA3937_RS03410 | | polysaccharide biosynthesis protein | low | > 74 |
Pseudomonas fluorescens FW300-N2E2 | 0.63 | Pf6N2E2_1812 | | peptide ABC transporter, ATP-binding protein | 0.45 | Pf6N2E2_2506 | | nucleotide sugar epimerase/dehydratase WbpM | low | > 103 |
Pseudomonas sp. RS175 | 0.61 | PFR28_00049 | | Oligopeptide transport ATP-binding protein OppD | 0.46 | PFR28_00932 | | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | low | > 88 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_2264 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.45 | Psyr_3636 | | Polysaccharide biosynthesis protein CapD | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_2264 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.45 | Psyr_3636 | | Polysaccharide biosynthesis protein CapD | low | > 86 |
Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_29385 | | peptide ABC transporter substrate-binding protein | 0.46 | AO356_03345 | | hypothetical protein | low | > 104 |
Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_2675 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | 0.44 | EX28DRAFT_0519 | | Predicted nucleoside-diphosphate sugar epimerases | low | > 76 |
Variovorax sp. OAS795 | 0.45 | ABID97_RS04460 | | ABC transporter ATP-binding protein | 0.45 | ABID97_RS02200 | | nucleoside-diphosphate sugar epimerase/dehydratase | low | > 91 |
Rhodopseudomonas palustris CGA009 | 0.45 | TX73_007420 | | ABC transporter ATP-binding protein | 0.21 | TX73_020640 | | nucleoside-diphosphate sugar epimerase/dehydratase | low | > 86 |
Azospirillum sp. SherDot2 | 0.44 | MPMX19_04416 | | Dipeptide transport ATP-binding protein DppD | 0.26 | MPMX19_01807 | | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS31475 | | ABC transporter ATP-binding protein | 0.32 | QEN71_RS25590 | | nucleoside-diphosphate sugar epimerase/dehydratase | low | > 153 |
Cupriavidus basilensis FW507-4G11 | 0.43 | RR42_RS11230 | | peptide ABC transporter ATP-binding protein | 0.43 | RR42_RS15825 | | capsular biosynthesis protein | low | > 128 |
Paraburkholderia bryophila 376MFSha3.1 | 0.43 | H281DRAFT_01032 | | peptide/nickel transport system ATP-binding protein | 0.33 | H281DRAFT_04851 | | NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC | low | > 103 |
Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_4825 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.29 | Ac3H11_1539 | | UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) | low | > 79 |
Vibrio cholerae E7946 ATCC 55056 | 0.42 | CSW01_05560 | | ABC transporter ATP-binding protein | 0.40 | CSW01_01350 | | polysaccharide biosynthesis protein | low | > 62 |
Rhodospirillum rubrum S1H | 0.42 | Rru_A0589 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) | 0.25 | Rru_A3656 | | Polysaccharide biosynthesis protein CapD (NCBI) | — | — |
Bosea sp. OAE506 | 0.41 | ABIE41_RS02275 | | ABC transporter ATP-binding protein | 0.19 | ABIE41_RS03855 | | nucleoside-diphosphate sugar epimerase/dehydratase | — | — |
Burkholderia phytofirmans PsJN | 0.40 | BPHYT_RS18675 | | peptide ABC transporter ATP-binding protein | 0.33 | BPHYT_RS04385 | | nucleoside-diphosphate sugar oxidoreductase | low | > 109 |
Pseudomonas putida KT2440 | 0.40 | PP_0879 | | dipeptide ABC transporter - putative ATP binding subunit | 0.46 | PP_1805 | | Polysaccharide biosynthesis protein | low | > 96 |
Dinoroseobacter shibae DFL-12 | 0.40 | Dshi_3796 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | 0.32 | Dshi_3857 | | polysaccharide biosynthesis protein CapD (RefSeq) | low | > 64 |
Pseudomonas fluorescens FW300-N2E3 | 0.39 | AO353_05405 | | peptide ABC transporter ATP-binding protein | 0.46 | AO353_01970 | | hypothetical protein | low | > 101 |
Pseudomonas fluorescens GW456-L13 | 0.39 | PfGW456L13_5057 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.46 | PfGW456L13_2191 | | nucleotide sugar epimerase/dehydratase WbpM | low | > 87 |
Pseudomonas simiae WCS417 | 0.39 | PS417_04050 | | peptide ABC transporter ATP-binding protein | 0.45 | PS417_08190 | | membrane protein | low | > 88 |
Pseudomonas fluorescens SBW25 | 0.39 | PFLU_RS04090 | | ABC transporter ATP-binding protein | 0.45 | PFLU_RS08190 | | polysaccharide biosynthesis protein | low | > 109 |
Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS11095 | | ABC transporter ATP-binding protein | 0.29 | ABCV34_RS13035 | | nucleoside-diphosphate sugar epimerase/dehydratase | low | > 48 |
Pseudomonas fluorescens SBW25-INTG | 0.39 | PFLU_RS04090 | | ABC transporter ATP-binding protein | 0.45 | PFLU_RS08190 | | polysaccharide biosynthesis protein | low | > 109 |
Pseudomonas sp. S08-1 | 0.39 | OH686_08715 | | Dipeptide ABC transporter, ATP-binding protein DppD | 0.47 | OH686_20915 | | nucleotide sugar epimerase/dehydratase WbpM | low | > 80 |
Shewanella oneidensis MR-1 | 0.31 | SO1802 | sapD | peptide ABC transporter, ATP-binding protein (NCBI ptt file) | 0.47 | SO3171 | | polysaccharide biosynthesis protein (NCBI ptt file) | — | — |
Shewanella amazonensis SB2B | 0.30 | Sama_1232 | | peptide ABC transporter, ATP-binding protein (RefSeq) | 0.49 | Sama_2244 | | polysaccharide biosynthesis protein (RefSeq) | low | > 62 |
Not shown: 25 genomes with orthologs for HSERO_RS15940 only; 27 genomes with orthologs for HSERO_RS21110 only