Conservation of cofitness between HSERO_RS23825 and HSERO_RS20710 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23825 hypothetical protein 1.0 HSERO_RS20710 peptidase M16 0.51 1
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.53 ABZR87_RS06950 pitrilysin family protein low > 80
Ralstonia solanacearum GMI1000 0.25 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.53 RS_RS01910 insulinase family protein low > 80
Ralstonia solanacearum PSI07 0.25 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.53 RPSI07_RS22240 insulinase family protein low > 81
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.53 RALBFv3_RS11060 insulinase family protein low > 76
Ralstonia solanacearum UW163 0.24 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.53 UW163_RS02520 insulinase family protein
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.53 RR42_RS01980 peptidase M16 low > 128
Dechlorosoma suillum PS 0.21 Dsui_2868 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein 0.56 Dsui_1025 putative Zn-dependent peptidase low > 51
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.38 Pf1N1B4_2322 FIG015547: peptidase, M16 family low > 87
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.39 AO353_08255 peptidase M16 low > 101
Pseudomonas stutzeri RCH2 0.19 Psest_1634 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 0.38 Psest_0257 Predicted Zn-dependent peptidases low > 67
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.38 PfGW456L13_992 FIG015547: peptidase, M16 family low > 87
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.37 AO356_13330 peptidase M16 low > 104
Pseudomonas sp. S08-1 0.19 OH686_20990 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.39 OH686_14230 peptidase, M16 family low > 80
Pseudomonas sp. RS175 0.18 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.38 PFR28_04260 putative zinc protease 0.22 68
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.37 Pf6N2E2_4581 FIG015547: peptidase, M16 family low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.38 Psyr_4752 Insulinase-like:Peptidase M16, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.38 Psyr_4752 Insulinase-like:Peptidase M16, C-terminal low > 86
Pseudomonas simiae WCS417 0.17 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.38 PS417_26815 peptidase M16 low > 88
Pseudomonas putida KT2440 0.17 PP_1751 methyltransferase/FAD-dependent oxidoreductase 0.38 PP_5112 putative processin peptidase low > 96
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.37 PFLU_RS28460 insulinase family protein low > 109
Pseudomonas fluorescens SBW25 0.16 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.37 PFLU_RS28460 insulinase family protein low > 109
Shewanella sp. ANA-3 0.15 Shewana3_1474 FAD dependent oxidoreductase (RefSeq) 0.26 Shewana3_3940 peptidase M16 domain-containing protein (RefSeq) low > 73
Acidovorax sp. GW101-3H11 0.14 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.47 Ac3H11_3875 FIG015547: peptidase, M16 family low > 79
Variovorax sp. SCN45 0.14 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.48 GFF2316 FIG015547: peptidase, M16 family low > 127
Shewanella oneidensis MR-1 0.13 SO3073 conserved hypothetical protein (NCBI ptt file) 0.26 SO4537.2 hypothetical Zn-dependent peptidase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.12 Shew_2411 FAD dependent oxidoreductase (RefSeq) 0.27 Shew_3581 peptidase M16 domain-containing protein (RefSeq) low > 60
Variovorax sp. OAS795 0.12 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.47 ABID97_RS23885 pitrilysin family protein low > 91
Acinetobacter radioresistens SK82 0.09 MPMX26_02642 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.36 MPMX26_01630 putative zinc protease

Not shown: 36 genomes with orthologs for HSERO_RS23825 only; 27 genomes with orthologs for HSERO_RS20710 only