Conservation of cofitness between HSERO_RS05535 and HSERO_RS16515 in Herbaspirillum seropedicae SmR1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05535 LysR family transcriptional regulator 1.0 HSERO_RS16515 isopropylmalate isomerase 0.38 9
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS16205 LysR family transcriptional regulator 0.80 RR42_RS14400 isopropylmalate isomerase low > 128
Paraburkholderia graminis OAS925 0.53 ABIE53_001240 DNA-binding transcriptional LysR family regulator 0.80 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit low > 113
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_00128 transcriptional regulator, LysR family 0.81 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit low > 103
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS04820 LysR family transcriptional regulator 0.81 BPHYT_RS33915 isopropylmalate isomerase 0.68 9
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS25180 LysR family transcriptional regulator 0.80 QEN71_RS17605 3-isopropylmalate dehydratase large subunit low > 153
Ralstonia solanacearum UW163 0.48 UW163_RS09140 LysR family transcriptional regulator 0.82 UW163_RS11105 3-isopropylmalate dehydratase large subunit — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS00130 LysR substrate-binding domain-containing protein 0.82 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit low > 80
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS04530 LysR family transcriptional regulator 0.82 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF4112 Transcriptional regulator 0.73 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 90
Ralstonia solanacearum GMI1000 0.48 RS_RS12100 LysR family transcriptional regulator 0.82 RS_RS10000 3-isopropylmalate dehydratase large subunit low > 80
Caulobacter crescentus NA1000 0.47 CCNA_03140 LysR-family transcriptional regulator 0.62 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_03140 LysR-family transcriptional regulator 0.62 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Ralstonia solanacearum PSI07 0.45 RPSI07_RS12845 LysR family transcriptional regulator 0.82 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit low > 81
Variovorax sp. OAS795 0.42 ABID97_RS17495 LysR family transcriptional regulator 0.75 ABID97_RS08465 3-isopropylmalate dehydratase large subunit — —
Variovorax sp. SCN45 0.40 GFF470 Transcriptional regulator, LysR family 0.75 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU3313 transcriptional regulator, LysR family (TIGR) 0.21 DVU2982 leuC 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) low > 55
Serratia liquefaciens MT49 0.36 IAI46_11680 LysR family transcriptional regulator 0.61 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Rahnella sp. WP5 0.34 EX31_RS16990 LysR family transcriptional regulator 0.62 EX31_RS03690 3-isopropylmalate dehydratase large subunit low > 89
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_3735 LysR family transcriptional regulator YnfL 0.72 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 103
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_09290 LysR family transcriptional regulator 0.73 AO356_21400 isopropylmalate isomerase low > 104
Dickeya dadantii 3937 0.33 DDA3937_RS10670 LysR family transcriptional regulator 0.62 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit low > 74
Sinorhizobium meliloti 1021 0.33 SM_b20009 transcriptional regulator 0.68 SMc03823 isopropylmalate isomerase large subunit low > 103
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_2138 transcriptional regulator, LysR family (RefSeq) 0.21 DvMF_1792 3-isopropylmalate dehydratase large subunit (RefSeq) low > 51
Castellaniella sp019104865 MT123 0.24 ABCV34_RS01520 LysR family transcriptional regulator 0.76 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit low > 48
Shewanella amazonensis SB2B 0.17 Sama_3283 DNA-binding transcriptional regulator IlvY (RefSeq) 0.60 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.82 42

Not shown: 0 genomes with orthologs for HSERO_RS05535 only; 77 genomes with orthologs for HSERO_RS16515 only