Conservation of cofitness between HSERO_RS05550 and HSERO_RS15630 in Herbaspirillum seropedicae SmR1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05550 transketolase 1.0 HSERO_RS15630 exodeoxyribonuclease III 0.37 3
Acidovorax sp. GW101-3H11 0.83 Ac3H11_2070 Transketolase, N-terminal section (EC 2.2.1.1) 0.60 Ac3H11_4433 Exodeoxyribonuclease III (EC 3.1.11.2) — —
Enterobacter sp. TBS_079 0.75 MPMX20_03535 Apulose-4-phosphate transketolase subunit A 0.30 MPMX20_01864 Exodeoxyribonuclease III low > 85
Dickeya dadantii 3937 0.74 DDA3937_RS08175 transketolase 0.29 DDA3937_RS10310 exodeoxyribonuclease III low > 74
Klebsiella michiganensis M5al 0.74 BWI76_RS08905 transketolase 0.29 BWI76_RS11665 exodeoxyribonuclease III low > 92
Sinorhizobium meliloti 1021 0.72 SMc00270 transketolase subunit alpha 0.40 SMc02077 exodeoxyribonuclease III protein low > 103
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS11595 transketolase 0.64 QEN71_RS05680 exodeoxyribonuclease III low > 153
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_24510 transketolase 0.27 AO353_27875 exonuclease III low > 101
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_27325 transketolase 0.35 AO356_01850 exodeoxyribonuclease III low > 104
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS33720 transketolase 0.67 RR42_RS07325 exodeoxyribonuclease III low > 128
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS30430 transketolase 0.65 BPHYT_RS12925 exodeoxyribonuclease III low > 109
Azospirillum sp. SherDot2 0.63 MPMX19_04768 Apulose-4-phosphate transketolase subunit A 0.42 MPMX19_04331 Exodeoxyribonuclease 0.41 45
Paraburkholderia graminis OAS925 0.63 ABIE53_004987 transketolase 0.65 ABIE53_002802 exodeoxyribonuclease-3 low > 113
Bosea sp. OAE506 0.63 ABIE41_RS01130 transketolase 0.38 ABIE41_RS15705 exodeoxyribonuclease III low > 77
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_06379 transketolase subunit A 0.64 H281DRAFT_00456 Exodeoxyribonuclease III — —
Magnetospirillum magneticum AMB-1 0.36 AMB_RS00335 transketolase 0.41 AMB_RS12755 exodeoxyribonuclease III — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_2625 Transketolase, N-terminal subunit 0.32 Ga0059261_3499 exodeoxyribonuclease III low > 68
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS01690 transketolase 0.35 ABZR88_RS19760 exodeoxyribonuclease III — —
Variovorax sp. OAS795 0.32 ABID97_RS11190 transketolase 0.61 ABID97_RS09955 exodeoxyribonuclease III 0.29 39
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_1741 Transketolase, N-terminal section (EC 2.2.1.1) 0.34 Pf6N2E2_2237 Exodeoxyribonuclease III (EC 3.1.11.2) low > 103
Pseudomonas sp. RS175 0.31 PFR28_01927 Apulose-4-phosphate transketolase subunit A 0.35 PFR28_01207 Exodeoxyribonuclease III low > 88
Pectobacterium carotovorum WPP14 0.30 HER17_RS09355 transketolase 0.30 HER17_RS11085 exodeoxyribonuclease III low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF1904 Transketolase, N-terminal section (EC 2.2.1.1) 0.29 GFF3490 Exodeoxyribonuclease III (EC 3.1.11.2) low > 78
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0310 Transketolase, N-terminal subunit 0.29 EX28DRAFT_1753 exodeoxyribonuclease III low > 76
Rahnella sp. WP5 0.30 EX31_RS19495 transketolase 0.29 EX31_RS06330 exodeoxyribonuclease III low > 89
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS15180 transketolase 0.34 CA265_RS16670 exodeoxyribonuclease III — —
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS18165 transketolase 0.29 PFLU_RS18930 exodeoxyribonuclease III low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS18165 transketolase 0.29 PFLU_RS18930 exodeoxyribonuclease III low > 109
Escherichia coli ECOR38 0.28 HEPCGN_10925 transketolase 0.29 HEPCGN_05265 xthA exodeoxyribonuclease III low > 87
Pantoea sp. MT58 0.27 IAI47_11795 transketolase 0.28 IAI47_08990 exodeoxyribonuclease III low > 76
Rhizobium sp. OAE497 0.25 ABIE40_RS25150 1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein 0.44 ABIE40_RS08420 exodeoxyribonuclease III low > 107

Not shown: 5 genomes with orthologs for HSERO_RS05550 only; 58 genomes with orthologs for HSERO_RS15630 only