Conservation of cofitness between HSERO_RS19115 and HSERO_RS15040 in Herbaspirillum seropedicae SmR1

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS19115 D-lactate dehydrogenase 1.0 HSERO_RS15040 poly(R)-hydroxyalkanoic acid synthase 0.33 17
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS01125 FAD-linked oxidase C-terminal domain-containing protein 0.52 ABZR87_RS13300 class I poly(R)-hydroxyalkanoic acid synthase low > 80
Ralstonia solanacearum PSI07 0.71 RPSI07_RS11820 FAD-binding protein 0.52 RPSI07_RS15985 class I poly(R)-hydroxyalkanoic acid synthase low > 81
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS03515 D-lactate dehydrogenase 0.48 BPHYT_RS09145 poly-beta-hydroxybutyrate polymerase 0.22 44
Paraburkholderia graminis OAS925 0.70 ABIE53_000845 D-lactate dehydrogenase (cytochrome) 0.48 ABIE53_002064 polyhydroxyalkanoate synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_04684 D-lactate dehydrogenase (cytochrome) 0.49 H281DRAFT_00851 polyhydroxyalkanoate synthase low > 103
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS05485 lactate dehydrogenase 0.52 RALBFv3_RS01505 class I poly(R)-hydroxyalkanoic acid synthase low > 76
Ralstonia solanacearum GMI1000 0.70 RS_RS13340 FAD-binding protein 0.52 RS_RS08220 class I poly(R)-hydroxyalkanoic acid synthase low > 80
Ralstonia solanacearum UW163 0.70 UW163_RS08140 lactate dehydrogenase 0.52 UW163_RS14815 class I poly(R)-hydroxyalkanoic acid synthase — —
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS26575 FAD-linked oxidase C-terminal domain-containing protein 0.49 QEN71_RS22205 class I poly(R)-hydroxyalkanoic acid synthase low > 153
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS17285 2-hydroxy-acid oxidase 0.49 RR42_RS07605 poly-beta-hydroxybutyrate polymerase — —
Acidovorax sp. GW101-3H11 0.67 Ac3H11_4909 D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) 0.51 Ac3H11_2304 Polyhydroxyalkanoic acid synthase low > 79
Variovorax sp. SCN45 0.66 GFF3343 D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) 0.50 GFF808 Polyhydroxyalkanoic acid synthase low > 127
Dechlorosoma suillum PS 0.65 Dsui_0378 FAD/FMN-dependent dehydrogenase 0.49 Dsui_2537 poly(R)-hydroxyalkanoic acid synthase, class I — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF2008 D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) 0.52 GFF4797 Polyhydroxyalkanoic acid synthase low > 90
Castellaniella sp019104865 MT123 0.64 ABCV34_RS06820 FAD-linked oxidase C-terminal domain-containing protein 0.44 ABCV34_RS01895 class I poly(R)-hydroxyalkanoic acid synthase low > 48
Pseudomonas fluorescens SBW25 0.62 PFLU_RS15570 FAD-binding protein 0.27 PFLU_RS01950 class II poly(R)-hydroxyalkanoic acid synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS15570 FAD-binding protein 0.27 PFLU_RS01950 class II poly(R)-hydroxyalkanoic acid synthase low > 109
Azospirillum sp. SherDot2 0.61 MPMX19_00624 putative FAD-linked oxidoreductase 0.36 MPMX19_03965 Poly(3-hydroxyalkanoate) polymerase subunit PhaC low > 112
Azospirillum brasilense Sp245 0.60 AZOBR_RS12240 2-hydroxy-acid oxidase 0.36 AZOBR_RS07810 poly(3-hydroxyalkanoate) synthetase low > 97
Rhodospirillum rubrum S1H 0.60 Rru_A1124 D-lactate dehydrogenase (cytochrome) (NCBI) 0.36 Rru_A2413 Poly(R)-hydroxyalkanoic acid synthase, class I (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.60 AMB_RS15030 FAD-binding protein 0.37 AMB_RS18850 class I poly(R)-hydroxyalkanoic acid synthase low > 64
Bosea sp. OAE506 0.57 ABIE41_RS12785 FAD-linked oxidase C-terminal domain-containing protein 0.32 ABIE41_RS19185 class I poly(R)-hydroxyalkanoic acid synthase low > 77
Rhodopseudomonas palustris CGA009 0.52 TX73_018150 FAD-linked oxidase C-terminal domain-containing protein 0.33 TX73_012925 class I poly(R)-hydroxyalkanoic acid synthase — —
Rhizobium sp. OAE497 0.50 ABIE40_RS11610 FAD-linked oxidase C-terminal domain-containing protein 0.30 ABIE40_RS08635 class I poly(R)-hydroxyalkanoic acid synthase low > 107
Dinoroseobacter shibae DFL-12 0.50 Dshi_1361 D-lactate dehydrogenase (cytochrome) (RefSeq) 0.31 Dshi_2233 poly(R)-hydroxyalkanoic acid synthase, class I (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.50 PGA1_c28240 putative D-lactate dehydrogenase 0.30 PGA1_c20930 poly(3-hydroxyalkanoate) polymerase PhaC low > 62

Not shown: 8 genomes with orthologs for HSERO_RS19115 only; 13 genomes with orthologs for HSERO_RS15040 only