Conservation of cofitness between HSERO_RS16570 and HSERO_RS14770 in Herbaspirillum seropedicae SmR1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16570 membrane protein 1.0 HSERO_RS14770 GTP-binding protein HflX 0.29 17
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_22925 histidine kinase 0.53 AO356_08650 GTPase HflX low > 104
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_467 Sensory box/GGDEF family protein 0.53 Pf6N2E2_3613 GTP-binding protein HflX low > 103
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS22465 membrane protein 0.61 RR42_RS13110 GTP-binding protein low > 128
Pseudomonas sp. RS175 0.63 PFR28_02457 putative signaling protein 0.53 PFR28_05122 GTPase HflX low > 88
Ralstonia solanacearum PSI07 0.62 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase 0.59 RPSI07_RS18070 GTPase HflX low > 81
Pseudomonas simiae WCS417 0.62 PS417_12760 histidine kinase 0.49 PS417_02495 GTPase HflX low > 88
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase 0.49 PFLU_RS02575 GTPase HflX low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase 0.49 PFLU_RS02575 GTPase HflX low > 109
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_3263 Sensory box/GGDEF family protein 0.52 PfGW456L13_153 GTP-binding protein HflX low > 87
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_4670 Sensory box/GGDEF family protein 0.53 Pf1N1B4_1411 GTP-binding protein HflX low > 87
Ralstonia solanacearum GMI1000 0.61 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase 0.60 RS_RS06115 GTPase HflX low > 80
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS07670 bifunctional diguanylate cyclase/phosphodiesterase 0.59 ABZR87_RS10945 GTPase HflX low > 80
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_22910 histidine kinase 0.51 AO353_13150 GTPase HflX low > 101
Pseudomonas putida KT2440 0.61 PP_3581 conserved membrane protein of unknown function 0.54 PP_4893 GTPase HflX low > 96
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS11715 bifunctional diguanylate cyclase/phosphodiesterase 0.60 RALBFv3_RS15305 GTPase HflX
Ralstonia solanacearum UW163 0.61 UW163_RS01870 bifunctional diguanylate cyclase/phosphodiesterase 0.60 UW163_RS12770 GTPase HflX
Rahnella sp. WP5 0.60 EX31_RS12105 bifunctional diguanylate cyclase/phosphodiesterase 0.47 EX31_RS08815 GTPase HflX low > 89
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase 0.70 QEN71_RS06005 GTPase HflX low > 153
Pantoea sp. MT58 0.57 IAI47_03280 EAL domain-containing protein 0.51 IAI47_02595 GTPase HflX low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_3316 diguanylate cyclase (GGDEF) domain 0.51 EX28DRAFT_3370 GTP-binding protein HflX low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_04172 putative signaling protein 0.52 MPMX20_00454 GTPase HflX low > 85
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_2486 diguanylate cyclase/phosphodiesterase 0.51 Psyr_0573 GTP-binding protein HflX low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_2486 diguanylate cyclase/phosphodiesterase 0.51 Psyr_0573 GTP-binding protein HflX low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF2120 FIG00554530: hypothetical protein 0.51 GFF826 GTP-binding protein HflX low > 78
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS29225 diguanylate phosphodiesterase 0.70 BPHYT_RS12550 GTP-binding protein HflX low > 109
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_01476 diguanylate cyclase/phosphodiesterase 0.70 H281DRAFT_00522 GTP-binding protein HflX low > 103
Paraburkholderia graminis OAS925 0.39 ABIE53_005195 diguanylate cyclase (GGDEF)-like protein 0.70 ABIE53_002736 GTP-binding protein HflX low > 113
Variovorax sp. SCN45 0.38 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.51 GFF1001 Ribosome LSU-associated GTP-binding protein HflX low > 127
Pseudomonas sp. S08-1 0.32 OH686_19830 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.53 OH686_09465 GTP-binding protein HflX low > 80

Not shown: 3 genomes with orthologs for HSERO_RS16570 only; 38 genomes with orthologs for HSERO_RS14770 only