Conservation of cofitness between HSERO_RS22470 and HSERO_RS14670 in Herbaspirillum seropedicae SmR1

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22470 D-xylose ABC transporter permease 1.0 HSERO_RS14670 phosphoenolpyruvate carboxylase 0.35 19
Pseudomonas simiae WCS417 0.74 PS417_10930 D-xylose ABC transporter permease 0.22 PS417_06060 phosphoenolpyruvate carboxylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS11290 sugar ABC transporter permease 0.21 PFLU_RS06130 phosphoenolpyruvate carboxylase low > 109
Pseudomonas fluorescens SBW25 0.72 PFLU_RS11290 sugar ABC transporter permease 0.21 PFLU_RS06130 phosphoenolpyruvate carboxylase low > 109
Pseudomonas sp. RS175 0.71 PFR28_02351 Xylose transport system permease protein XylH 0.22 PFR28_00368 Phosphoenolpyruvate carboxylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_1457 Xylose ABC transporter, permease protein XylH 0.22 Pf6N2E2_3103 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_2886 xylose ABC transporter membrane protein 0.21 Psyr_1318 Phosphoenolpyruvate carboxylase low > 86
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_2886 xylose ABC transporter membrane protein 0.21 Psyr_1318 Phosphoenolpyruvate carboxylase low > 86
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_28515 sugar ABC transporter permease 0.22 AO356_06185 phosphoenolpyruvate carboxylase low > 104
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS25860 sugar ABC transporter permease 0.60 QEN71_RS24955 phosphoenolpyruvate carboxylase 0.39 65
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_03879 xylose ABC transporter membrane protein 0.60 H281DRAFT_00197 Phosphoenolpyruvate carboxylase, type 1 low > 103
Paraburkholderia graminis OAS925 0.64 ABIE53_004932 D-xylose transport system permease protein 0.59 ABIE53_001314 phosphoenolpyruvate carboxylase low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS32810 xylose ABC transporter permease 0.59 BPHYT_RS05225 phosphoenolpyruvate carboxylase low > 109
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS18230 sugar ABC transporter permease 0.63 ABZR87_RS16140 phosphoenolpyruvate carboxylase low > 80
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS14410 sugar ABC transporter permease 0.23 ABZR86_RS11555 phosphoenolpyruvate carboxylase low > 74
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS23495 sugar ABC transporter permease 0.63 RALBFv3_RS04250 phosphoenolpyruvate carboxylase — —
Ralstonia solanacearum UW163 0.51 UW163_RS16745 sugar ABC transporter permease 0.63 UW163_RS09420 phosphoenolpyruvate carboxylase — —
Serratia liquefaciens MT49 0.51 IAI46_00295 sugar ABC transporter permease 0.23 IAI46_24525 phosphoenolpyruvate carboxylase low > 86
Ralstonia solanacearum PSI07 0.50 RPSI07_RS07645 sugar ABC transporter permease 0.62 RPSI07_RS13100 phosphoenolpyruvate carboxylase 0.51 23
Rahnella sp. WP5 0.50 EX31_RS09750 sugar ABC transporter permease 0.22 EX31_RS14200 phosphoenolpyruvate carboxylase low > 89
Ralstonia solanacearum GMI1000 0.49 RS_RS24955 sugar ABC transporter permease 0.63 RS_RS11840 phosphoenolpyruvate carboxylase 0.49 10
Pectobacterium carotovorum WPP14 0.49 HER17_RS21070 sugar ABC transporter permease 0.23 HER17_RS20655 phosphoenolpyruvate carboxylase low > 75
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3833 ABC-type xylose transport system, permease component 0.22 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) low > 76
Pantoea sp. MT58 0.48 IAI47_00180 sugar ABC transporter permease 0.22 IAI47_00895 phosphoenolpyruvate carboxylase low > 76
Dickeya dadantii 3937 0.48 DDA3937_RS20920 sugar ABC transporter permease 0.22 DDA3937_RS20360 phosphoenolpyruvate carboxylase low > 74
Dickeya dianthicola ME23 0.48 DZA65_RS00325 sugar ABC transporter permease 0.22 DZA65_RS00895 phosphoenolpyruvate carboxylase low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS00325 sugar ABC transporter permease 0.23 HGI48_RS00850 phosphoenolpyruvate carboxylase low > 71
Enterobacter sp. TBS_079 0.48 MPMX20_00162 Xylose transport system permease protein XylH 0.22 MPMX20_04524 Phosphoenolpyruvate carboxylase 0.21 22
Klebsiella michiganensis M5al 0.47 BWI76_RS27040 xylose ABC transporter permease 0.22 BWI76_RS00835 phosphoenolpyruvate carboxylase low > 92
Escherichia coli ECRC62 0.46 BNILDI_03660 xylH xylose ABC transporter permease XylH 0.23 BNILDI_05785 ppc phosphoenolpyruvate carboxylase low > 75
Escherichia coli BW25113 0.46 b3568 xylH D-xylose transporter subunit (NCBI) 0.23 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) low > 76
Escherichia coli Nissle 1917 0.46 ECOLIN_RS20405 xylose ABC transporter permease XylH 0.23 ECOLIN_RS22835 phosphoenolpyruvate carboxylase low > 55
Escherichia coli ECOR27 0.46 NOLOHH_07885 xylH xylose ABC transporter permease XylH 0.23 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase low > 75
Escherichia coli ECRC102 0.46 NIAGMN_13700 xylH xylose ABC transporter permease XylH 0.23 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC101 0.46 MCAODC_06455 xylH xylose ABC transporter permease XylH 0.23 MCAODC_04095 ppc phosphoenolpyruvate carboxylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00136 Xylose transport system permease protein XylH 0.23 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase low > 73
Escherichia coli ECOR38 0.46 HEPCGN_14825 xylH xylose ABC transporter permease XylH 0.23 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase low > 87
Escherichia coli ECRC100 0.46 OKFHMN_15940 xylH xylose ABC transporter permease XylH 0.23 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase low > 80
Escherichia coli ECRC98 0.46 JDDGAC_19570 xylH xylose ABC transporter permease XylH 0.23 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase low > 86
Escherichia coli ECRC99 0.46 KEDOAH_12210 xylH xylose ABC transporter permease XylH 0.23 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli BL21 0.46 ECD_03420 D-xylose ABC transporter permease 0.23 ECD_03841 phosphoenolpyruvate carboxylase low > 61
Escherichia fergusonii Becca 0.46 EFB2_00239 Xylose transport system permease protein XylH 0.23 EFB2_04658 Phosphoenolpyruvate carboxylase low > 86

Not shown: 0 genomes with orthologs for HSERO_RS22470 only; 40 genomes with orthologs for HSERO_RS14670 only