Conservation of cofitness between HSERO_RS03615 and HSERO_RS10950 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03615 (dimethylallyl)adenosine tRNA methylthiotransferase 1.0 HSERO_RS10950 RNA methyltransferase 0.39 1
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.51 QEN71_RS06495 RNA methyltransferase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.75 GFF613 tRNA-i(6)A37 methylthiotransferase 0.31 GFF4900 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) — —
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.49 BPHYT_RS12065 RNA methyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.48 H281DRAFT_00625 RNA methyltransferase, TrmH family low > 103
Dechlorosoma suillum PS 0.74 Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.41 Dsui_2679 rRNA methylase low > 51
Ralstonia solanacearum PSI07 0.73 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.49 RPSI07_RS17025 RNA methyltransferase low > 81
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS02855 dimethylallyladenosine tRNA methylthiotransferase 0.48 RR42_RS11800 RNA methyltransferase low > 128
Ralstonia solanacearum UW163 0.73 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.49 UW163_RS13780 RNA methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.49 RALBFv3_RS00450 RNA methyltransferase — —
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.50 ABZR87_RS11900 RNA methyltransferase low > 80
Ralstonia solanacearum GMI1000 0.73 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.48 RS_RS07120 RNA methyltransferase — —
Acidovorax sp. GW101-3H11 0.72 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase 0.33 Ac3H11_433 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) low > 79
Variovorax sp. OAS795 0.71 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.32 ABID97_RS17095 RNA methyltransferase — —
Variovorax sp. SCN45 0.71 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) 0.35 GFF378 RNA (nucleoside 2'-O)-methyltransferase low > 127
Castellaniella sp019104865 MT123 0.70 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.41 ABCV34_RS04035 RNA methyltransferase low > 48
Acinetobacter radioresistens SK82 0.56 MPMX26_02667 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.41 MPMX26_02198 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB low > 36
Azospirillum brasilense Sp245 0.43 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase 0.15 AZOBR_RS16105 RNA methyltransferase low > 97
Azospirillum sp. SherDot2 0.43 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.15 MPMX19_01597 23S rRNA (uridine(2479)-2'-O)-methyltransferase low > 112
Agrobacterium fabrum C58 0.43 Atu0356 miaB protein 0.18 Atu0341 rRNA methylase — —
Rhizobium sp. OAE497 0.43 ABIE40_RS01705 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.19 ABIE40_RS01810 RNA methyltransferase low > 107
Sinorhizobium meliloti 1021 0.43 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase 0.18 SMc01130 tRNA/rRNA methyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_00054 tRNA 2-methylthioadenosine synthase 0.15 CCNA_01245 23S rRNA methyltransferase low > 67
Caulobacter crescentus NA1000 0.42 CCNA_00054 tRNA 2-methylthioadenosine synthase 0.15 CCNA_01245 23S rRNA methyltransferase low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.15 A4249_RS05435 RNA methyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_1604 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.17 Ga0059261_0920 rRNA methylases low > 68
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_2374 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.19 Synpcc7942_1199 probable tRNA/rRNA methyltransferase low > 38
Mycobacterium tuberculosis H37Rv 0.35 Rv2733c Conserved hypothetical alanine, arginine-rich protein 0.17 Rv1644 Possible 23S rRNA methyltransferase TsnR low > 58
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS21675 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.21 CA265_RS13975 RNA methyltransferase 0.56 56

Not shown: 73 genomes with orthologs for HSERO_RS03615 only; 1 genomes with orthologs for HSERO_RS10950 only