Conservation of cofitness between HSERO_RS07545 and HSERO_RS10055 in Herbaspirillum seropedicae SmR1

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07545 2-dehydro-3-deoxygluconokinase 1.0 HSERO_RS10055 glycerate kinase 0.26 9
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_05211 2-dehydro-3-deoxygluconokinase 0.54 H281DRAFT_00894 glycerate kinase low > 103
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS11300 2-dehydro-3-deoxygluconokinase 0.54 BPHYT_RS09440 glycerate kinase — —
Serratia liquefaciens MT49 0.60 IAI46_00095 sugar kinase 0.32 IAI46_05265 glycerate kinase low > 86
Pantoea sp. MT58 0.60 IAI47_00120 sugar kinase 0.25 IAI47_04105 glycerate kinase low > 76
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS07255 sugar kinase 0.50 QEN71_RS21995 glycerate kinase low > 153
Enterobacter asburiae PDN3 0.58 EX28DRAFT_3815 Sugar kinases, ribokinase family 0.28 EX28DRAFT_2867 glycerate kinase low > 76
Klebsiella michiganensis M5al 0.57 BWI76_RS26950 2-dehydro-3-deoxygluconokinase 0.27 BWI76_RS22820 glycerate kinase low > 92
Enterobacter sp. TBS_079 0.57 MPMX20_00179 2-dehydro-3-deoxygluconokinase 0.29 MPMX20_03656 Glycerate 2-kinase low > 85
Pseudomonas putida KT2440 0.54 PP_3378 putative 2-ketogluconokinase 0.32 PP_3178 glycerate kinase low > 96
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_629 2-ketogluconate kinase (EC 2.7.1.13) 0.33 Pf6N2E2_460 Glycerate kinase (EC 2.7.1.31) low > 103
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_24685 2-dehydro-3-deoxygluconokinase 0.34 AO356_22870 glycerate kinase low > 104
Pseudomonas simiae WCS417 0.53 PS417_12565 2-dehydro-3-deoxygluconokinase 0.32 PS417_13970 glycerate kinase low > 88
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS09470 2-dehydro-3-deoxygluconokinase 0.44 RR42_RS23230 glycerate kinase 0.38 63
Pseudomonas sp. RS175 0.53 PFR28_01598 2-dehydro-3-deoxygluconokinase 0.35 PFR28_02469 Glycerate 2-kinase 0.29 30
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_4765 2-ketogluconate kinase (EC 2.7.1.13) 0.35 Pf1N1B4_4998 Glycerate kinase (EC 2.7.1.31) — —
Pseudomonas fluorescens SBW25 0.52 PFLU_RS13250 sugar kinase 0.34 PFLU_RS14645 glycerate kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS13250 sugar kinase 0.34 PFLU_RS14645 glycerate kinase low > 109
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_26875 2-dehydro-3-deoxygluconokinase 0.34 AO353_26900 glycerate kinase low > 101
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_2950 2-ketogluconate kinase (EC 2.7.1.13) 0.34 PfGW456L13_2941 Glycerate kinase (EC 2.7.1.31) low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF1533 Fructokinase (EC 2.7.1.4) 0.28 GFF4430 Glycerate kinase (EC 2.7.1.31) low > 78
Escherichia coli BW25113 0.18 b1772 b1772 putative kinase (VIMSS) 0.27 b0514 glxK glycerate kinase II (NCBI) low > 76
Escherichia coli BL21 0.18 ECD_01741 putative kinase 0.27 ECD_00464 glycerate kinase II — —
Escherichia fergusonii Becca 0.18 EFB2_02222 putative sugar kinase YdjH 0.27 EFB2_03548 Glycerate 3-kinase low > 86
Escherichia coli Nissle 1917 0.18 ECOLIN_RS09885 sugar kinase 0.28 ECOLIN_RS02985 glycerate 3-kinase — —
Escherichia coli ECOR27 0.18 NOLOHH_17295 ydjH Uncharacterized sugar kinase YdjH 0.28 NOLOHH_00875 glxK glycerate 3-kinase low > 75
Escherichia coli ECRC101 0.18 MCAODC_13000 cscK aminoimidazole riboside kinase 0.28 MCAODC_27105 glxK glycerate 3-kinase low > 87
Escherichia coli ECRC102 0.18 NIAGMN_20245 cscK aminoimidazole riboside kinase 0.28 NIAGMN_05940 glxK glycerate 3-kinase — —
Escherichia coli ECRC98 0.18 JDDGAC_26430 cscK aminoimidazole riboside kinase 0.28 JDDGAC_11535 glxK glycerate 3-kinase low > 86
Escherichia coli ECRC62 0.18 BNILDI_16080 rbsK sugar kinase 0.28 BNILDI_22305 glxK glycerate 3-kinase low > 75
Escherichia coli ECRC100 0.18 OKFHMN_22470 cscK aminoimidazole riboside kinase 0.28 OKFHMN_07885 glxK glycerate 3-kinase low > 80
Escherichia coli ECOR38 0.18 HEPCGN_05155 rbsK sugar kinase 0.28 HEPCGN_06530 glxK glycerate 3-kinase low > 87
Pectobacterium carotovorum WPP14 0.18 HER17_RS19640 aminoimidazole riboside kinase 0.29 HER17_RS04100 glycerate kinase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_01960 putative sugar kinase YdjH 0.27 OHPLBJKB_03167 Glycerate 3-kinase low > 73
Dickeya dianthicola 67-19 0.17 HGI48_RS01780 aminoimidazole riboside kinase 0.27 HGI48_RS17085 glycerate kinase — —
Dickeya dadantii 3937 0.17 DDA3937_RS01855 aminoimidazole riboside kinase 0.28 DDA3937_RS17030 glycerate kinase — —
Dickeya dianthicola ME23 0.17 DZA65_RS01855 aminoimidazole riboside kinase 0.27 DZA65_RS18160 glycerate kinase low > 75
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_17490 aminoimidazole riboside kinase 0.28 CSW01_18660 glycerate kinase low > 62
Escherichia coli ECRC99 0.17 KEDOAH_01345 rbsK sugar kinase 0.28 KEDOAH_20080 glxK glycerate 3-kinase — —
Rahnella sp. WP5 0.15 EX31_RS00440 aminoimidazole riboside kinase 0.29 EX31_RS07975 glycerate kinase low > 89
Bacteroides stercoris CC31F 0.13 HMPREF1181_RS00960 adenosine kinase 0.27 HMPREF1181_RS16785 glycerate kinase low > 56
Xanthomonas campestris pv. campestris strain 8004 0.12 Xcc-8004.3385.1 Fructokinase in mannoside utilization gene cluster (EC 2.7.1.4) 0.29 Xcc-8004.5387.1 Glycerate kinase (EC 2.7.1.31) low > 74
Parabacteroides merdae CL09T00C40 0.09 HMPREF1078_RS05605 sugar kinase 0.26 HMPREF1078_RS08645 glycerate kinase low > 61

Not shown: 12 genomes with orthologs for HSERO_RS07545 only; 16 genomes with orthologs for HSERO_RS10055 only