Conservation of cofitness between HSERO_RS01325 and HSERO_RS08535 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01325 cation/multidrug efflux protein 1.0 HSERO_RS08535 glycine/betaine ABC transporter substrate-binding protein 0.34 19
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_05197 Multidrug efflux pump subunit AcrB 0.47 H281DRAFT_03487 osmoprotectant transport system substrate-binding protein low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_002354 multidrug efflux pump 0.47 ABIE53_001496 osmoprotectant transport system substrate-binding protein low > 113
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS07190 efflux RND transporter permease subunit 0.50 QEN71_RS19710 glycine betaine ABC transporter substrate-binding protein low > 153
Pseudomonas fluorescens SBW25 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.47 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.47 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein low > 109
Pseudomonas simiae WCS417 0.50 PS417_06115 multidrug transporter AcrB 0.47 PS417_04020 glycine/betaine ABC transporter substrate-binding protein 0.17 30
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_16365 multidrug transporter AcrB 0.49 AO353_05430 glycine/betaine ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_4730 RND efflux transporter 0.48 PfGW456L13_5063 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 87
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3063 RND efflux transporter 0.49 Pf1N1B4_1132 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 87
Pseudomonas putida KT2440 0.49 PP_1517 RND efflux transporter 0.42 PP_0870 putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein low > 96
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_3091 RND efflux transporter 0.48 Pf6N2E2_3331 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 103
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_06130 multidrug transporter AcrB 0.48 AO356_07295 glycine/betaine ABC transporter substrate-binding protein low > 104
Pseudomonas sp. RS175 0.49 PFR28_00379 Cobalt-zinc-cadmium resistance protein CzcA 0.46 PFR28_00116 Osmoprotectant-binding protein OsmX low > 88
Azospirillum sp. SherDot2 0.48 MPMX19_05260 Cobalt-zinc-cadmium resistance protein CzcA 0.23 MPMX19_05108 Glycine betaine-binding protein YehZ low > 112
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS07915 multidrug transporter AcrB 0.53 RR42_RS04815 glycine/betaine ABC transporter substrate-binding protein low > 128
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0346 Acriflavin resistance protein 0.48 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0346 Acriflavin resistance protein 0.48 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system low > 86
Rhizobium sp. OAE497 0.42 ABIE40_RS17045 efflux RND transporter permease subunit 0.21 ABIE40_RS02190 ABC transporter substrate-binding protein low > 107
Sinorhizobium meliloti 1021 0.42 SM_b20345 efflux protein 0.40 SMa1462 ABC transporter low > 103
Agrobacterium fabrum C58 0.40 Atu5381 AcrB/AcrD/AcrF family protein 0.21 Atu0199 ABC transporter, substrate binding protein (proline/glycine/betaine)
Bosea sp. OAE506 0.38 ABIE41_RS18635 efflux RND transporter permease subunit 0.24 ABIE41_RS21060 glycine betaine ABC transporter substrate-binding protein low > 77
Rahnella sp. WP5 0.38 EX31_RS17700 efflux RND transporter permease subunit 0.24 EX31_RS23935 ABC transporter substrate-binding protein low > 89
Klebsiella michiganensis M5al 0.35 BWI76_RS05720 cation/multidrug efflux pump 0.23 BWI76_RS19505 ABC transporter substrate-binding protein low > 92
Enterobacter sp. TBS_079 0.35 MPMX20_02160 Nickel and cobalt resistance protein CnrA 0.46 MPMX20_02068 Osmoprotectant-binding protein OsmX low > 85
Pantoea sp. MT58 0.35 IAI47_21725 efflux RND transporter permease subunit 0.45 IAI47_09775 glycine betaine ABC transporter substrate-binding protein low > 76
Enterobacter asburiae PDN3 0.35 EX28DRAFT_1393 Cation/multidrug efflux pump 0.45 EX28DRAFT_1488 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) low > 76
Azospirillum brasilense Sp245 0.34 AZOBR_RS32765 multidrug transporter 0.19 AZOBR_RS15770 osmoprotectant uptake system substrate-binding protein low > 97
Marinobacter adhaerens HP15 0.33 HP15_1118 transporter, AcrB/D/F family 0.22 HP15_991 substrate-binding region of ABC-type glycine betaine transport system low > 73

Not shown: 40 genomes with orthologs for HSERO_RS01325 only; 18 genomes with orthologs for HSERO_RS08535 only