Conservation of cofitness between HSERO_RS18940 and HSERO_RS07880 in Herbaspirillum seropedicae SmR1

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS18940 sn-glycerol-3-phosphate ABC transporter ATP-binding protein 1.0 HSERO_RS07880 peptide ABC transporter substrate-binding protein 0.26 14
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS15570 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.78 RALBFv3_RS02360 ABC transporter ATP-binding protein low > 76
Ralstonia solanacearum UW163 0.60 UW163_RS13030 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.78 UW163_RS11365 ABC transporter ATP-binding protein — —
Ralstonia solanacearum GMI1000 0.60 RS_RS06350 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.78 RS_RS09515 ABC transporter ATP-binding protein low > 80
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS12955 glycerol-3-phosphate ABC transporter ATP-binding protein 0.78 RR42_RS10815 methionine ABC transporter ATP-binding protein low > 128
Ralstonia solanacearum PSI07 0.59 RPSI07_RS17785 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.78 RPSI07_RS15010 ABC transporter ATP-binding protein low > 81
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS11100 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.79 ABZR87_RS14290 ABC transporter ATP-binding protein low > 80
Paraburkholderia graminis OAS925 0.58 ABIE53_003654 sn-glycerol 3-phosphate transport system ATP-binding protein 0.43 ABIE53_006350 peptide/nickel transport system ATP-binding protein low > 113
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS17470 glycerol-3-phosphate ABC transporter ATP-binding protein 0.63 BPHYT_RS31200 peptide ABC transporter substrate-binding protein low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF1262 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) 0.43 GFF1366 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 90
Serratia liquefaciens MT49 0.58 IAI46_01005 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.43 IAI46_14190 ABC transporter ATP-binding protein low > 86
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_05701 glycerol 3-phosphate ABC transporter ATP-binding protein 0.41 H281DRAFT_03126 oligopeptide transport system ATP-binding protein low > 103
Rahnella sp. WP5 0.57 EX31_RS14745 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.43 EX31_RS00050 ABC transporter ATP-binding protein low > 89
Dickeya dianthicola ME23 0.57 DZA65_RS21650 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.44 DZA65_RS09325 ATP-binding cassette domain-containing protein low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS20635 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.44 HGI48_RS09020 ABC transporter ATP-binding protein low > 71
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4785 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) 0.42 Ac3H11_2051 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 79
Azospirillum brasilense Sp245 0.56 AZOBR_RS00060 sn-glycerol-3-phosphate ABC transporter ATP-binding protein 0.61 AZOBR_RS31020 methionine ABC transporter ATP-binding protein low > 97
Dickeya dadantii 3937 0.56 DDA3937_RS00735 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.43 DDA3937_RS08950 ABC transporter ATP-binding protein low > 74
Pectobacterium carotovorum WPP14 0.56 HER17_RS00625 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.41 HER17_RS11005 ABC transporter ATP-binding protein low > 75
Variovorax sp. OAS795 0.55 ABID97_RS07215 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC 0.41 ABID97_RS07050 ABC transporter ATP-binding protein low > 91
Enterobacter asburiae PDN3 0.55 EX28DRAFT_4282 ABC-type sugar transport systems, ATPase components 0.43 EX28DRAFT_0871 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_04326 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.43 MPMX20_02584 Oligopeptide transport ATP-binding protein OppD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF558 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) 0.43 GFF2743 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) low > 78
Klebsiella michiganensis M5al 0.55 BWI76_RS26290 glycerol-3-phosphate ABC transporter ATP-binding protein 0.43 BWI76_RS17225 oligopeptide ABC transporter ATP-binding protein OppD low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00253 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.44 OHPLBJKB_02437 Oligopeptide transport ATP-binding protein OppD low > 73
Escherichia coli ECOR27 0.54 NOLOHH_08575 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 NOLOHH_20405 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 75
Escherichia coli ECRC99 0.54 KEDOAH_11355 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 KEDOAH_25640 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD — —
Escherichia coli BL21 0.54 ECD_03299 sn-glycerol-3-phosphate ABC transporter ATPase 0.44 ECD_01220 oligopeptide ABC transporter ATPase low > 61
Escherichia coli ECRC98 0.54 JDDGAC_20415 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 JDDGAC_05930 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 86
Escherichia coli BW25113 0.54 b3450 ugpC ATP-binding component of sn-glycerol 3-phosphate transport system (VIMSS) 0.44 b1246 oppD oligopeptide transporter ATP-binding component (NCBI) low > 76
Escherichia coli ECRC102 0.54 NIAGMN_14555 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 NIAGMN_27590 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD — —
Escherichia coli ECRC100 0.54 OKFHMN_16785 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 OKFHMN_28645 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 80
Escherichia coli ECRC101 0.54 MCAODC_07315 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 MCAODC_21615 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 87
Escherichia coli Nissle 1917 0.54 ECOLIN_RS19730 sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 ECOLIN_RS07525 murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD — —
Escherichia fergusonii Becca 0.54 EFB2_00372 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.44 EFB2_02679 Oligopeptide transport ATP-binding protein OppD low > 86
Escherichia coli ECOR38 0.54 HEPCGN_15605 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 HEPCGN_25110 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 87
Escherichia coli ECRC62 0.54 BNILDI_02930 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.44 BNILDI_18550 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 75
Rhizobium sp. OAE497 0.53 ABIE40_RS20850 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.43 ABIE40_RS13580 ABC transporter ATP-binding protein low > 107
Agrobacterium fabrum C58 0.53 Atu3188 glycerol-3-phosphate transporter ATP-binding subunit 0.62 Atu5256 ABC transporter nucleotide binding/ATPase (oligopeptide) — —
Dinoroseobacter shibae DFL-12 0.50 Dshi_2017 ABC transporter related (RefSeq) 0.42 Dshi_0884 oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.48 PGA1_c02740 sn-glycerol-3-phosphate import ATP-binding protein UgbC 0.45 PGA1_262p01010 dipeptide transport ATP-binding protein DppD low > 62
Rhodospirillum rubrum S1H 0.47 Rru_A1260 ABC transporter component (NCBI) 0.45 Rru_A2175 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) low > 58

Not shown: 13 genomes with orthologs for HSERO_RS18940 only; 10 genomes with orthologs for HSERO_RS07880 only