Conservation of cofitness between HSERO_RS12675 and HSERO_RS02620 in Herbaspirillum seropedicae SmR1

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12675 AraC family transcriptional regulator 1.0 HSERO_RS02620 cobalt transporter 0.34 11
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_1673 transcriptional regulator, AraC family with amidase-like domain 0.13 Ga0059261_1887 cation diffusion facilitator family transporter low > 68
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_156 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.18 Pf1N1B4_2726 Cobalt-zinc-cadmium resistance protein — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS10275 GlxA family transcriptional regulator 0.18 PFLU_RS26490 cation diffusion facilitator family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS10275 GlxA family transcriptional regulator 0.18 PFLU_RS26490 cation diffusion facilitator family transporter low > 109
Pseudomonas simiae WCS417 0.45 PS417_09670 AraC family transcriptional regulator 0.18 PS417_24560 ferrous iron transporter low > 88
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_6090 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.17 Pf6N2E2_5036 Cobalt-zinc-cadmium resistance protein low > 103
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_2369 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.17 PfGW456L13_1393 Cobalt-zinc-cadmium resistance protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_19580 AraC family transcriptional regulator 0.17 AO353_06310 ferrous iron transporter low > 101
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_21045 AraC family transcriptional regulator 0.17 AO356_15475 ferrous iron transporter low > 104
Pseudomonas sp. RS175 0.44 PFR28_02891 HTH-type transcriptional regulator CdhR 0.17 PFR28_03835 Ferrous-iron efflux pump FieF low > 88
Pseudomonas sp. S08-1 0.41 OH686_23095 Transcriptional regulator, AraC family 0.16 OH686_08810 Ferrous-iron efflux pump FieF low > 80
Variovorax sp. SCN45 0.38 GFF5573 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.16 GFF2069 Cobalt-zinc-cadmium resistance protein low > 127
Variovorax sp. OAS795 0.38 ABID97_RS26935 GlxA family transcriptional regulator 0.13 ABID97_RS24945 cation diffusion facilitator family transporter low > 91
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS28635 AraC family transcriptional regulator 0.63 RR42_RS30535 cobalt transporter low > 128
Enterobacter sp. TBS_079 0.34 MPMX20_02687 HTH-type transcriptional regulator CdhR 0.17 MPMX20_04553 Ferrous-iron efflux pump FieF low > 85
Serratia liquefaciens MT49 0.34 IAI46_16680 GlxA family transcriptional regulator 0.19 IAI46_24650 CDF family cation-efflux transporter FieF low > 86
Pseudomonas stutzeri RCH2 0.33 Psest_0752 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.17 Psest_0573 cation diffusion facilitator family transporter low > 67
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0781 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.53 EX28DRAFT_3666 cation diffusion facilitator family transporter low > 76
Klebsiella michiganensis M5al 0.32 BWI76_RS12980 AraC family transcriptional regulator 0.59 BWI76_RS13865 cation diffusion facilitator family transporter low > 92
Pectobacterium carotovorum WPP14 0.27 HER17_RS21035 transcriptional regulator FtrA 0.19 HER17_RS00720 CDF family cation-efflux transporter FieF low > 75
Azospirillum sp. SherDot2 0.26 MPMX19_01004 HTH-type transcriptional regulator CdhR 0.18 MPMX19_00714 Ferrous-iron efflux pump FieF low > 112
Dechlorosoma suillum PS 0.24 Dsui_3428 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.16 Dsui_0813 cation diffusion facilitator family transporter low > 51
Escherichia coli ECOR38 0.24 HEPCGN_26900 ftrA transcriptional regulator FtrA 0.17 HEPCGN_12480 fieF CDF family cation-efflux transporter FieF low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_2740 transcriptional regulator, AraC family with amidase-like domain protein 0.17 Psyr_4333 Cation efflux protein low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_2740 transcriptional regulator, AraC family with amidase-like domain protein 0.17 Psyr_4333 Cation efflux protein low > 86
Escherichia coli ECRC102 0.23 NIAGMN_25195 ftrA transcriptional regulator FtrA 0.17 NIAGMN_11590 fieF CDF family cation-efflux transporter FieF — —
Escherichia coli ECRC101 0.23 MCAODC_16875 ftrA transcriptional regulator FtrA 0.17 MCAODC_04335 fieF CDF family cation-efflux transporter FieF low > 87
Escherichia coli ECRC98 0.23 JDDGAC_03560 ftrA transcriptional regulator FtrA 0.17 JDDGAC_17460 fieF CDF family cation-efflux transporter FieF low > 86
Escherichia coli ECRC99 0.23 KEDOAH_27380 ftrA transcriptional regulator FtrA 0.17 KEDOAH_14320 fieF CDF family cation-efflux transporter FieF — —
Escherichia coli ECRC100 0.23 OKFHMN_01050 ftrA transcriptional regulator FtrA 0.17 OKFHMN_13835 fieF CDF family cation-efflux transporter FieF — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF2648 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.15 GFF1671 Cobalt-zinc-cadmium resistance protein low > 90
Shewanella sp. ANA-3 0.20 Shewana3_3975 transcriptional regulator (RefSeq) 0.18 Shewana3_0255 cation diffusion facilitator family transporter (RefSeq) low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_06675 AraC family transcriptional regulator 0.19 CA264_04200 cation-efflux pump low > 74
Agrobacterium fabrum C58 0.19 Atu0264 transcriptional regulator, AraC family 0.19 Atu2274 cation efflux system protein low > 89
Shewanella amazonensis SB2B 0.19 Sama_3593 AraC family transcriptional regulator (RefSeq) 0.17 Sama_3430 cation efflux family protein (RefSeq) low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS13765 GlxA family transcriptional regulator 0.19 ABZR88_RS06065 cation diffusion facilitator family transporter low > 71
Phaeobacter inhibens DSM 17395 0.19 PGA1_c15870 transcriptional regulator, AraC family 0.17 PGA1_c01130 putative cation efflux pump 0.27 54
Rhodospirillum rubrum S1H 0.18 Rru_A0758 Transcriptional Regulator, AraC family (NCBI) 0.20 Rru_A2628 Cation efflux protein (NCBI) low > 58

Not shown: 10 genomes with orthologs for HSERO_RS12675 only; 36 genomes with orthologs for HSERO_RS02620 only