Conservation of cofitness between HSERO_RS09540 and HSERO_RS02415 in Herbaspirillum seropedicae SmR1

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09540 diguanylate cyclase 1.0 HSERO_RS02415 hemolysin D 0.25 15
Dechlorosoma suillum PS 0.50 Dsui_2890 diguanylate cyclase (GGDEF) domain-containing protein 0.35 Dsui_3181 RND family efflux transporter, MFP subunit low > 51
Castellaniella sp019104865 MT123 0.39 ABCV34_RS04665 GGDEF domain-containing protein 0.38 ABCV34_RS04230 efflux RND transporter periplasmic adaptor subunit low > 48
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS02060 diguanylate cyclase 0.43 BPHYT_RS16175 hemolysin D low > 109
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02115 diguanylate cyclase/phosphodiesterase 0.42 H281DRAFT_04171 membrane fusion protein, multidrug efflux system low > 103
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS00990 phosphodiesterase 0.47 QEN71_RS29870 efflux RND transporter periplasmic adaptor subunit low > 153
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_4208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.47 PfGW456L13_2955 RND efflux system, membrane fusion protein CmeA low > 87
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.46 Pf1N1B4_4773 RND efflux system, membrane fusion protein CmeA — —
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_02445 diguanylate phosphodiesterase 0.46 AO353_26840 RND transporter low > 101
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS35575 diguanylate cyclase 0.48 RR42_RS32415 hemolysin D low > 128
Pseudomonas simiae WCS417 0.35 PS417_09320 diguanylate phosphodiesterase 0.48 PS417_12590 RND transporter — —
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS09975 EAL and GGDEF domain-containing protein 0.49 PFLU_RS13285 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS09975 EAL and GGDEF domain-containing protein 0.49 PFLU_RS13285 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5779 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.46 Pf6N2E2_1660 RND efflux system, membrane fusion protein CmeA low > 103
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_19330 diguanylate phosphodiesterase 0.46 AO356_28725 RND transporter — —
Pseudomonas sp. RS175 0.35 PFR28_03170 hypothetical protein 0.44 PFR28_02462 Multidrug resistance protein MexA 0.18 22
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS22805 phosphodiesterase 0.50 ABZR87_RS05310 efflux RND transporter periplasmic adaptor subunit low > 80
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1101 diguanylate cyclase/phosphodiesterase 0.47 Ac3H11_4449 RND efflux system, membrane fusion protein CmeA low > 79
Ralstonia solanacearum PSI07 0.34 RPSI07_RS01135 phosphodiesterase 0.56 RPSI07_RS23900 efflux RND transporter periplasmic adaptor subunit low > 81
Variovorax sp. SCN45 0.33 GFF6204 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) 0.49 GFF3726 RND efflux system, membrane fusion protein low > 127
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS13860 phosphodiesterase 0.36 LRK54_RS02095 efflux RND transporter periplasmic adaptor subunit low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS13575 GGDEF domain-containing protein 0.36 LRK55_RS01870 efflux RND transporter periplasmic adaptor subunit low > 63
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_13885 eAL phosphodiesterase 0.38 OKGIIK_09165 acrA efflux transporter periplasmic adaptor subunit low > 52
Agrobacterium fabrum C58 0.21 Atu0826 hypothetical protein 0.40 Atu3203 RND multidrug efflux membrane permease low > 89
Sinorhizobium meliloti 1021 0.18 SMc00033 hypothetical protein 0.42 SMc02868 multidrug efflux system protein 0.48 15
Azospirillum sp. SherDot2 0.14 MPMX19_00227 hypothetical protein 0.45 MPMX19_05883 Multidrug resistance protein MexA low > 112
Rhodospirillum rubrum S1H 0.14 Rru_A3230 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) 0.44 Rru_A2050 Secretion protein HlyD (NCBI) low > 58

Not shown: 8 genomes with orthologs for HSERO_RS09540 only; 30 genomes with orthologs for HSERO_RS02415 only