Conservation of cofitness between HSERO_RS21870 and HSERO_RS02120 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21870 amidase 1.0 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.27 6
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2260 Amidase 0.76 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2260 Amidase 0.76 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS09600 amidase family protein 0.87 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.35 60
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4128 Amidase 0.68 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 79
Variovorax sp. OAS795 0.65 ABID97_RS05450 amidase family protein 0.68 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC low > 91
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS28435 amidase 0.70 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Variovorax sp. SCN45 0.64 GFF670 putative amidase Psyr_2260 0.70 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) low > 127
Ralstonia solanacearum PSI07 0.64 RPSI07_RS07495 amidase 0.70 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS23135 amidase family protein 0.71 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC low > 80
Paraburkholderia graminis OAS925 0.64 ABIE53_004135 amidase 0.86 ABIE53_002857 phosphomethylpyrimidine synthase low > 113
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS16205 amidase 0.70 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC low > 76
Ralstonia solanacearum UW163 0.63 UW163_RS16940 amidase 0.70 UW163_RS03640 phosphomethylpyrimidine synthase ThiC — —
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_01567 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit 0.87 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Bosea sp. OAE506 0.42 ABIE41_RS05910 amidase family protein 0.61 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC low > 77
Rhodopseudomonas palustris CGA009 0.27 TX73_008920 amidase family protein 0.63 TX73_018540 phosphomethylpyrimidine synthase ThiC low > 86
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS29965 amidase 0.86 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Azospirillum brasilense Sp245 0.24 AZOBR_RS22750 glutamyl-tRNA(Gln) amidotransferase 0.65 AZOBR_RS07940 phosphomethylpyrimidine synthase low > 97
Azospirillum sp. SherDot2 0.22 MPMX19_04676 Acylamidase 0.62 MPMX19_00336 Phosphomethylpyrimidine synthase low > 112
Pseudomonas putida KT2440 0.20 PP_0613 Amidase family protein 0.76 PP_4922 Phosphomethylpyrimidine synthase low > 96
Pantoea sp. MT58 0.19 IAI47_07685 amidase 0.68 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Pseudomonas fluorescens SBW25 0.19 PFLU_RS19480 amidase 0.75 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS19480 amidase 0.75 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas simiae WCS417 0.19 PS417_17690 amidase 0.75 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Castellaniella sp019104865 MT123 0.14 ABCV34_RS00730 amidase 0.84 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC low > 48
Mycobacterium tuberculosis H37Rv 0.14 Rv3175 Possible amidase (aminohydrolase) 0.52 Rv0423c Probable thiamine biosynthesis protein ThiC — —
Escherichia fergusonii Becca 0.13 EFB2_01915 Acylamidase 0.69 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli Nissle 1917 0.13 ECOLIN_RS11535 colibactin biosynthesis amidase ClbL 0.69 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC — —
Dinoroseobacter shibae DFL-12 0.12 Dshi_3419 Amidase (RefSeq) 0.64 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) — —

Not shown: 0 genomes with orthologs for HSERO_RS21870 only; 65 genomes with orthologs for HSERO_RS02120 only