Conservation of cofitness between HSERO_RS20600 and HSERO_RS01990 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS20600 transcription regulator protein 1.0 HSERO_RS01990 shikimate 5-dehydrogenase 0.28 14
Variovorax sp. SCN45 0.55 GFF6087 Transcriptional regulator, AcrR family 0.42 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 127
Variovorax sp. OAS795 0.54 ABID97_RS22760 TetR/AcrR family transcriptional regulator 0.40 ABID97_RS06300 shikimate dehydrogenase
Rhodopseudomonas palustris CGA009 0.33 TX73_019515 TetR/AcrR family transcriptional regulator 0.20 TX73_022410 shikimate dehydrogenase
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS20570 TetR/AcrR family transcriptional regulator 0.54 RALBFv3_RS05945 shikimate dehydrogenase low > 76
Ralstonia solanacearum UW163 0.32 UW163_RS18605 TetR/AcrR family transcriptional regulator 0.54 UW163_RS07680 shikimate dehydrogenase
Ralstonia solanacearum GMI1000 0.32 RS_RS20050 TetR/AcrR family transcriptional regulator 0.54 RS_RS13890 shikimate dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.32 RPSI07_RS02170 TetR/AcrR family transcriptional regulator 0.54 RPSI07_RS11300 shikimate dehydrogenase low > 81
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS18280 TetR family transcriptional regulator 0.53 BPHYT_RS16975 shikimate 5-dehydrogenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_05852 transcriptional regulator, TetR family 0.53 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25)
Paraburkholderia graminis OAS925 0.31 ABIE53_000009 AcrR family transcriptional regulator 0.53 ABIE53_003560 shikimate dehydrogenase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF1608 Transcriptional regulator, TetR family 0.48 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 90
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS21235 TetR/AcrR family transcriptional regulator 0.54 ABZR87_RS01605 shikimate dehydrogenase low > 80
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS19445 TetR family transcriptional regulator 0.50 RR42_RS17645 shikimate dehydrogenase low > 128
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS28425 TetR/AcrR family transcriptional regulator 0.55 QEN71_RS27130 shikimate dehydrogenase low > 153
Dinoroseobacter shibae DFL-12 0.26 Dshi_3823 transcriptional regulator, TetR family (RefSeq) 0.25 Dshi_3450 shikimate 5-dehydrogenase (RefSeq)
Phaeobacter inhibens DSM 17395 0.26 PGA1_c26790 transcriptional regulator, TetR family 0.24 PGA1_c35150 shikimate dehydrogenase AroE
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_1890 Transcriptional regulator, TetR family 0.55 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS05450 TetR/AcrR family transcriptional regulator 0.17 A4249_RS13660 shikimate dehydrogenase
Magnetospirillum magneticum AMB-1 0.15 AMB_RS04325 TetR/AcrR family transcriptional regulator 0.17 AMB_RS23010 shikimate dehydrogenase
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_10935 TetR family transcriptional regulator 0.13 CA264_19075 shikimate dehydrogenase
Marinobacter adhaerens HP15 0.14 HP15_1123 transcriptional regulator, TetR family 0.47 HP15_3750 shikimate dehydrogenase
Rhodospirillum rubrum S1H 0.14 Rru_A1934 Transcriptional Regulator, TetR family (NCBI) 0.20 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI)
Mycobacterium tuberculosis H37Rv 0.13 Rv3557c Transcriptional regulatory protein (probably TetR-family) 0.12 Rv2552c Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase)
Azospirillum brasilense Sp245 0.13 AZOBR_RS21015 hypothetical protein 0.19 AZOBR_RS01765 shikimate 5-dehydrogenase
Pseudomonas sp. S08-1 0.13 OH686_04065 Acyclic terpenes utilization regulator AtuR, TetR family 0.54 OH686_12485 Shikimate 5-dehydrogenase I alpha low > 80
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS21535 TetR/AcrR family transcriptional regulator 0.54 PFLU_RS00120 shikimate dehydrogenase
Pseudomonas fluorescens SBW25 0.13 PFLU_RS21535 TetR/AcrR family transcriptional regulator 0.54 PFLU_RS00120 shikimate dehydrogenase
Pseudomonas simiae WCS417 0.12 PS417_19565 TetR family transcriptional regulator 0.55 PS417_00125 shikimate dehydrogenase

Not shown: 0 genomes with orthologs for HSERO_RS20600 only; 74 genomes with orthologs for HSERO_RS01990 only