Conservation of cofitness between HGI48_RS18515 and HGI48_RS18485 in Dickeya dianthicola 67-19

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS18515 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1.0 HGI48_RS18485 deoxyribonuclease I 0.71 3
Dickeya dianthicola ME23 0.99 DZA65_RS19650 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.99 DZA65_RS19620 deoxyribonuclease I 0.38 48
Dickeya dadantii 3937 0.97 DDA3937_RS18580 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.96 DDA3937_RS18550 deoxyribonuclease I low > 74
Pectobacterium carotovorum WPP14 0.88 HER17_RS02615 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.80 HER17_RS02645 deoxyribonuclease I low > 75
Serratia liquefaciens MT49 0.85 IAI46_01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.75 IAI46_21380 deoxyribonuclease I low > 86
Klebsiella michiganensis M5al 0.84 BWI76_RS02820 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.74 BWI76_RS24065 deoxyribonuclease I low > 92
Enterobacter sp. TBS_079 0.83 MPMX20_00515 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.77 MPMX20_03803 Endonuclease-1 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF881 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.74 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) low > 78
Escherichia coli ECRC99 0.83 KEDOAH_16215 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.74 KEDOAH_08855 endA deoxyribonuclease I — —
Escherichia coli ECOR27 0.83 NOLOHH_04200 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.75 NOLOHH_11155 endA deoxyribonuclease I low > 75
Escherichia coli ECRC62 0.83 BNILDI_07315 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.75 BNILDI_09735 endA deoxyribonuclease I low > 75
Escherichia coli ECRC98 0.83 JDDGAC_15580 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.74 JDDGAC_22915 endA deoxyribonuclease I low > 86
Escherichia coli ECRC100 0.83 OKFHMN_11940 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.74 OKFHMN_19285 endA deoxyribonuclease I low > 80
Escherichia coli ECRC101 0.83 MCAODC_02445 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.74 MCAODC_09805 endA deoxyribonuclease I low > 87
Escherichia coli BL21 0.83 ECD_04101 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.75 ECD_02775 DNA-specific endonuclease I low > 61
Escherichia fergusonii Becca 0.83 EFB2_04300 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.75 EFB2_00957 Endonuclease-1 low > 86
Escherichia coli ECOR38 0.83 HEPCGN_10140 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.75 HEPCGN_18590 endA deoxyribonuclease I low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_03802 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.75 OHPLBJKB_00773 Endonuclease-1 low > 73
Escherichia coli ECRC102 0.83 NIAGMN_09790 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.74 NIAGMN_17050 endA deoxyribonuclease I — —
Escherichia coli Nissle 1917 0.83 ECOLIN_RS24560 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.74 ECOLIN_RS16385 deoxyribonuclease I low > 55
Enterobacter asburiae PDN3 0.83 EX28DRAFT_3420 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.76 EX28DRAFT_2983 Endonuclease I low > 76
Escherichia coli BW25113 0.83 b4233 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) 0.75 b2945 endA DNA-specific endonuclease I (NCBI) 0.24 36
Rahnella sp. WP5 0.82 EX31_RS08665 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.74 EX31_RS02655 deoxyribonuclease I low > 89
Pantoea sp. MT58 0.80 IAI47_02755 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.73 IAI47_03625 deoxyribonuclease I low > 76
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 CSW01_02500 deoxyribonuclease 0.62 5
Shewanella sp. ANA-3 0.61 Shewana3_0791 UDP-N-acetylmuramate (RefSeq) 0.54 Shewana3_3443 endonuclease I (RefSeq) low > 73
Shewanella oneidensis MR-1 0.61 SO3805 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) 0.54 SO0833 endA endonuclease I (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.60 Shew_3144 UDP-N-acetylmuramate (RefSeq) 0.54 Shew_3223 deoxyribonuclease I (RefSeq) low > 60
Shewanella amazonensis SB2B 0.59 Sama_0769 UDP-N-acetylmuramate (RefSeq) 0.54 Sama_0576 deoxyribonuclease I (RefSeq) low > 62
Pseudomonas simiae WCS417 0.58 PS417_24800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 PS417_18420 deoxyribonuclease low > 88
Pseudomonas fluorescens SBW25 0.57 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_06550 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.43 AO353_20795 deoxyribonuclease low > 101
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_15235 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.43 AO356_00985 deoxyribonuclease low > 104
Pseudomonas sp. RS175 0.57 PFR28_03883 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.44 PFR28_02739 Extracellular deoxyribonuclease low > 88
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1344 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.44 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) low > 87
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.44 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.44 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2676 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.43 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) — —
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4982 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.43 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) low > 103
Pseudomonas stutzeri RCH2 0.55 Psest_0673 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.46 Psest_1274 Endonuclease I low > 67
Pseudomonas sp. S08-1 0.54 OH686_09400 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.42 OH686_20125 Endonuclease I precursor low > 80

Not shown: 33 genomes with orthologs for HGI48_RS18515 only; 0 genomes with orthologs for HGI48_RS18485 only