Conservation of cofitness between HGI48_RS10615 and HGI48_RS08780 in Dickeya dianthicola 67-19

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS10615 oxidoreductase 1.0 HGI48_RS08780 secretion protein HlyD 0.65 2
Dickeya dianthicola ME23 0.99 DZA65_RS11095 oxidoreductase 0.98 DZA65_RS09070 secretion protein HlyD low > 75
Dickeya dadantii 3937 0.96 DDA3937_RS10615 oxidoreductase 0.91 DDA3937_RS08640 secretion protein HlyD low > 74
Pectobacterium carotovorum WPP14 0.79 HER17_RS10790 oxidoreductase 0.65 HER17_RS13360 secretion protein HlyD low > 75
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1619 Predicted dehydrogenases and related proteins 0.58 EX28DRAFT_2196 Multidrug resistance efflux pump low > 76
Escherichia coli BL21 0.71 ECD_01593 putative oxidoreductase 0.55 ECD_00762 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor low > 61
Escherichia coli ECRC62 0.71 BNILDI_16880 ydgJ Uncharacterized oxidoreductase YdgJ 0.55 BNILDI_20935 hlyD secretion protein HlyD low > 75
Escherichia coli ECRC100 0.71 OKFHMN_27575 ydgJ Uncharacterized oxidoreductase YdgJ 0.55 OKFHMN_06300 hlyD secretion protein HlyD low > 80
Escherichia coli ECRC98 0.71 JDDGAC_02165 ydgJ Uncharacterized oxidoreductase YdgJ 0.55 JDDGAC_09935 hlyD secretion protein HlyD low > 86
Escherichia coli ECRC99 0.71 KEDOAH_00530 ydgJ Uncharacterized oxidoreductase YdgJ 0.55 KEDOAH_21610 hlyD secretion protein HlyD — —
Escherichia coli ECOR27 0.71 NOLOHH_18090 ydgJ Uncharacterized oxidoreductase YdgJ 0.55 NOLOHH_22655 hlyD secretion protein HlyD low > 75
Escherichia coli ECRC102 0.71 NIAGMN_00490 ydgJ Uncharacterized oxidoreductase YdgJ 0.55 NIAGMN_04345 hlyD secretion protein HlyD — —
Escherichia coli ECRC101 0.71 MCAODC_17835 ydgJ Uncharacterized oxidoreductase YdgJ 0.55 MCAODC_25515 hlyD secretion protein HlyD low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_02102 putative oxidoreductase YdgJ 0.55 OHPLBJKB_02918 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.71 ECOLIN_RS09060 oxidoreductase 0.55 ECOLIN_RS04235 secretion protein HlyD — —
Escherichia fergusonii Becca 0.71 EFB2_02368 putative oxidoreductase YdgJ 0.55 EFB2_03310 hypothetical protein low > 86
Escherichia coli ECOR38 0.70 HEPCGN_05955 ydgJ Uncharacterized oxidoreductase YdgJ 0.55 HEPCGN_01740 hlyD secretion protein HlyD low > 87
Enterobacter sp. TBS_079 0.70 MPMX20_02014 putative oxidoreductase YdgJ 0.59 MPMX20_01423 hypothetical protein low > 85
Escherichia coli BW25113 0.70 b1624 b1624 orf, hypothetical protein (VIMSS) 0.55 b0795 ybhG hypothetical protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF1812 Uncharacterized oxidoreductase ydgJ (EC 1.-.-.-) 0.58 GFF694 Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG low > 78
Klebsiella michiganensis M5al 0.70 BWI76_RS16330 oxidoreductase 0.58 BWI76_RS08880 secretion protein HlyD low > 92
Serratia liquefaciens MT49 0.70 IAI46_11530 oxidoreductase 0.64 IAI46_06610 secretion protein HlyD low > 86
Rahnella sp. WP5 0.67 EX31_RS06850 oxidoreductase 0.60 EX31_RS00880 secretion protein HlyD low > 89
Variovorax sp. OAS795 0.47 ABID97_RS14645 oxidoreductase 0.28 ABID97_RS10425 HlyD family efflux transporter periplasmic adaptor subunit 0.22 86
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_14510 oxidoreductase 0.13 CSW01_08330 hypothetical protein low > 62
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS19630 oxidoreductase 0.13 ABZR87_RS19890 efflux RND transporter periplasmic adaptor subunit low > 80
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_0656 Predicted dehydrogenases and related proteins 0.41 Ga0059261_2557 Multidrug resistance efflux pump low > 68
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS18690 oxidoreductase 0.10 RALBFv3_RS10190 secretion protein HlyD low > 76
Ralstonia solanacearum UW163 0.43 UW163_RS20440 oxidoreductase 0.10 UW163_RS03390 secretion protein HlyD — —
Ralstonia solanacearum PSI07 0.43 RPSI07_RS04900 oxidoreductase 0.10 RPSI07_RS23155 hypothetical protein low > 81
Ralstonia solanacearum GMI1000 0.43 RS_RS22255 oxidoreductase 0.10 RS_RS00805 secretion protein HlyD low > 80
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS29190 oxidoreductase 0.12 QEN71_RS17405 HlyD family efflux transporter periplasmic adaptor subunit low > 153
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_02415 Predicted dehydrogenase 0.13 H281DRAFT_03452 HlyD family secretion protein low > 103
Paraburkholderia graminis OAS925 0.40 ABIE53_000234 scyllo-inositol 2-dehydrogenase (NADP+) 0.11 ABIE53_005376 HlyD family secretion protein low > 113
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS02150 Gfo/Idh/MocA family oxidoreductase 0.13 HMPREF1078_RS10220 efflux RND transporter periplasmic adaptor subunit low > 61
Pseudomonas fluorescens SBW25 0.23 PFLU_RS12615 oxidoreductase 0.17 PFLU_RS28975 HlyD family efflux transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS12615 oxidoreductase 0.17 PFLU_RS28975 HlyD family efflux transporter periplasmic adaptor subunit low > 109
Pseudomonas sp. RS175 0.23 PFR28_02419 scyllo-inositol 2-dehydrogenase (NADP(+)) IolW 0.15 PFR28_04328 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.23 PS417_11880 oxidoreductase 0.17 PS417_27320 hemolysin secretion protein D low > 88
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_21375 oxidoreductase 0.15 AO353_08790 hemolysin secretion protein D low > 101
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_23195 oxidoreductase 0.16 AO356_12980 hemolysin secretion protein D 0.18 62
Pseudomonas fluorescens FW300-N2E2 0.22 Pf6N2E2_519 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) 0.17 Pf6N2E2_4473 HlyD family secretion protein low > 103
Azospirillum brasilense Sp245 0.12 AZOBR_RS29845 oxidoreductase 0.13 AZOBR_RS27955 glycoside hydrolase family 43 low > 97
Magnetospirillum magneticum AMB-1 0.11 AMB_RS00635 gfo/Idh/MocA family oxidoreductase 0.13 AMB_RS00920 secretion protein HlyD — —

Not shown: 15 genomes with orthologs for HGI48_RS10615 only; 22 genomes with orthologs for HGI48_RS08780 only