| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS01300 | | protoheme IX biogenesis protein HemY | 1.0 | HER17_RS21605 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.73 | 14 |
| Serratia liquefaciens MT49 | 0.79 | IAI46_00680 | | protoheme IX biogenesis protein HemY | 0.81 | IAI46_25115 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 86 |
| Dickeya dadantii 3937 | 0.76 | DDA3937_RS19935 | | protoheme IX biogenesis protein HemY | 0.80 | DDA3937_RS21600 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.57 | 19 |
| Rahnella sp. WP5 | 0.75 | EX31_RS15130 | | protoheme IX biogenesis protein HemY | 0.77 | EX31_RS06135 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 89 |
| Dickeya dianthicola 67-19 | 0.74 | HGI48_RS20090 | | protoheme IX biogenesis protein HemY | 0.80 | HGI48_RS21385 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 71 |
| Dickeya dianthicola ME23 | 0.74 | DZA65_RS21135 | | protoheme IX biogenesis protein HemY | 0.79 | DZA65_RS22365 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS24175 | hemY | protoheme IX biogenesis protein HemY | 0.72 | LU632_RS24810 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 74 |
| Escherichia coli ECOR27 | 0.73 | NOLOHH_06610 | hemY | protoheme IX biogenesis protein HemY | 0.76 | NOLOHH_06925 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_04251 | | Protein HemY | 0.76 | OHPLBJKB_04313 | | Ribosomal RNA small subunit methyltransferase G | low | > 73 |
| Escherichia fergusonii Becca | 0.73 | EFB2_04836 | | Protein HemY | 0.76 | EFB2_04893 | | Ribosomal RNA small subunit methyltransferase G | low | > 86 |
| Escherichia coli ECRC100 | 0.73 | OKFHMN_14465 | hemY | protoheme IX biogenesis protein HemY | 0.76 | OKFHMN_14790 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 80 |
| Escherichia coli ECRC62 | 0.73 | BNILDI_04925 | hemY | protoheme IX biogenesis protein HemY | 0.76 | BNILDI_04600 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 75 |
| Escherichia coli BW25113 | 0.73 | b3802 | hemY | predicted protoheme IX synthesis protein (NCBI) | 0.76 | b3740 | gidB | glucose-inhibited division protein B (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS21820 | | protoheme IX biogenesis protein HemY | 0.76 | ECOLIN_RS21510 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 55 |
| Escherichia coli ECRC99 | 0.73 | KEDOAH_13685 | hemY | protoheme IX biogenesis protein HemY | 0.76 | KEDOAH_13360 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | — | — |
| Escherichia coli ECRC102 | 0.73 | NIAGMN_12220 | hemY | protoheme IX biogenesis protein HemY | 0.76 | NIAGMN_12545 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | — | — |
| Escherichia coli BL21 | 0.73 | ECD_03677 | | putative protoheme IX synthesis protein | 0.76 | ECD_03624 | | 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein | 0.44 | 53 |
| Escherichia coli ECRC98 | 0.73 | JDDGAC_18090 | hemY | protoheme IX biogenesis protein HemY | 0.76 | JDDGAC_18410 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 86 |
| Escherichia coli ECRC101 | 0.73 | MCAODC_04970 | hemY | protoheme IX biogenesis protein HemY | 0.76 | MCAODC_05295 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 87 |
| Escherichia coli ECOR38 | 0.73 | HEPCGN_13185 | hemY | protoheme IX biogenesis protein HemY | 0.76 | HEPCGN_13505 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 87 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_04473 | | Protein HemY | 0.78 | MPMX20_04627 | | Ribosomal RNA small subunit methyltransferase G | low | > 85 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_4471 | | heme biosynthesis-associated TPR protein | 0.78 | EX28DRAFT_4016 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.69 | GFF226 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.75 | GFF1717 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | low | > 78 |
| Klebsiella michiganensis M5al | 0.69 | BWI76_RS01165 | | protoheme IX biogenesis protein HemY | 0.77 | BWI76_RS00225 | | 16S rRNA methyltransferase G | low | > 92 |
| Pantoea sp. MT58 | 0.68 | IAI47_18440 | | protoheme IX biogenesis protein HemY | 0.76 | IAI47_00295 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.25 | CSW01_00595 | | heme biosynthesis protein HemY | 0.63 | CSW01_14050 | | ribosomal RNA small subunit methyltransferase G | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.18 | B158DRAFT_0255 | | Uncharacterized enzyme of heme biosynthesis | 0.39 | B158DRAFT_0378 | | 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) | 0.50 | 40 |
| Pseudomonas stutzeri RCH2 | 0.16 | Psest_3745 | | Uncharacterized enzyme of heme biosynthesis | 0.44 | Psest_4364 | | 16S rRNA (guanine(527)-N(7))-methyltransferase GidB | low | > 67 |
| Marinobacter adhaerens HP15 | 0.15 | HP15_237 | | HemY domain protein | 0.42 | HP15_3689 | | glucose-inhibited division protein B | low | > 73 |
| Pseudomonas fluorescens FW300-N2E2 | 0.15 | Pf6N2E2_4433 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.46 | Pf6N2E2_4204 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.14 | AO356_12800 | | heme biosynthesis protein HemY | 0.46 | AO356_11670 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.13 | AO353_08975 | | heme biosynthesis protein HemY | 0.47 | AO353_10440 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 101 |
| Pseudomonas simiae WCS417 | 0.13 | PS417_27515 | | heme biosynthesis protein HemY | 0.44 | PS417_28515 | | 16S rRNA methyltransferase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.13 | PfGW456L13_859 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.47 | PfGW456L13_672 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | low | > 87 |
| Alteromonas macleodii MIT1002 | 0.13 | MIT1002_00099 | | putative protoheme IX biogenesis protein | 0.57 | MIT1002_04123 | | Ribosomal RNA small subunit methyltransferase G | low | > 70 |
| Pseudomonas fluorescens FW300-N1B4 | 0.13 | Pf1N1B4_2188 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.47 | Pf1N1B4_1935 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | — | — |
| Pseudomonas fluorescens SBW25 | 0.12 | PFLU_RS29195 | | heme biosynthesis protein HemY | 0.45 | PFLU_RS30170 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 109 |
| Shewanella loihica PV-4 | 0.12 | Shew_0315 | | HemY domain-containing protein (RefSeq) | 0.60 | Shew_3855 | gidB | glucose-inhibited division protein B (RefSeq) | 0.49 | 17 |
| Pseudomonas fluorescens SBW25-INTG | 0.12 | PFLU_RS29195 | | heme biosynthesis protein HemY | 0.45 | PFLU_RS30170 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 109 |
| Shewanella sp. ANA-3 | 0.12 | Shewana3_0383 | | HemY domain-containing protein (RefSeq) | 0.59 | Shewana3_0001 | gidB | 16S rRNA methyltransferase GidB (RefSeq) | low | > 73 |
| Pseudomonas sp. RS175 | 0.12 | PFR28_04363 | | Protein HemY | 0.47 | PFR28_04586 | | Ribosomal RNA small subunit methyltransferase G | low | > 88 |
| Pseudomonas putida KT2440 | 0.12 | PP_0189 | | putative heme biosynthesis protein | 0.44 | PP_0003 | | 16S RNA methyltransferase | low | > 96 |
| Pseudomonas sp. S08-1 | 0.12 | OH686_13915 | | Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.45 | OH686_12665 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.12 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | 0.47 | Psyr_5131 | | 16S rRNA m(7)G-527 methyltransferase | 0.36 | 48 |
| Shewanella amazonensis SB2B | 0.12 | Sama_3257 | | HemY protein (RefSeq) | 0.57 | Sama_3654 | gidB | 16S rRNA methyltransferase GidB (RefSeq) | low | > 62 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.12 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | 0.47 | Psyr_5131 | | 16S rRNA m(7)G-527 methyltransferase | low | > 86 |
Not shown: 1 genomes with orthologs for HER17_RS01300 only; 28 genomes with orthologs for HER17_RS21605 only