Conservation of cofitness between HER17_RS11650 and HER17_RS20585 in Pectobacterium carotovorum WPP14

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11650 cupin domain-containing protein 1.0 HER17_RS20585 Sec-independent protein translocase subunit TatC 0.65 12
Serratia liquefaciens MT49 0.84 IAI46_10385 cupin domain-containing protein 0.90 IAI46_01090 Sec-independent protein translocase subunit TatC low > 86
Dickeya dianthicola ME23 0.83 DZA65_RS11890 cupin domain-containing protein 0.90 DZA65_RS00980 Sec-independent protein translocase subunit TatC low > 75
Dickeya dianthicola 67-19 0.83 HGI48_RS11555 cupin domain-containing protein 0.88 HGI48_RS00920 Sec-independent protein translocase subunit TatC low > 71
Dickeya dadantii 3937 0.83 DDA3937_RS11510 cupin domain-containing protein 0.90 DDA3937_RS20305 Sec-independent protein translocase subunit TatC low > 74
Enterobacter asburiae PDN3 0.82 EX28DRAFT_1802 Uncharacterized conserved protein 0.83 EX28DRAFT_4503 Twin arginine targeting (Tat) protein translocase TatC low > 76
Rahnella sp. WP5 0.81 EX31_RS24550 cupin domain-containing protein 0.88 EX31_RS14600 Sec-independent protein translocase subunit TatC low > 89
Klebsiella michiganensis M5al 0.81 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.80 BWI76_RS01330 twin-arginine translocase subunit TatC — —
Enterobacter sp. TBS_079 0.80 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.82 MPMX20_04442 Sec-independent protein translocase protein TatC low > 85
Escherichia coli ECRC62 0.80 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 BNILDI_05125 tatC Sec-independent protein translocase subunit TatC low > 75
Escherichia coli BW25113 0.80 b1128 ycfD orf, hypothetical protein (VIMSS) 0.83 b3839 tatC TatABCE protein translocation system subunit (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3413 FIG002776: hypothetical protein 0.81 GFF265 Twin-arginine translocation protein TatC low > 78
Escherichia coli ECOR38 0.80 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 HEPCGN_12905 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.83 OHPLBJKB_04213 Sec-independent protein translocase protein TatC low > 73
Escherichia coli ECRC102 0.80 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 NIAGMN_12030 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli ECOR27 0.80 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 NOLOHH_06405 tatC Sec-independent protein translocase subunit TatC low > 75
Escherichia fergusonii Becca 0.80 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.83 EFB2_04777 Sec-independent protein translocase protein TatC low > 86
Escherichia coli ECRC99 0.80 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 KEDOAH_13875 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli ECRC100 0.80 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 OKFHMN_14275 tatC Sec-independent protein translocase subunit TatC low > 80
Escherichia coli BL21 0.80 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.83 ECD_03731 TatABCE protein translocation system subunit low > 61
Escherichia coli ECRC101 0.80 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 MCAODC_04780 tatC Sec-independent protein translocase subunit TatC low > 87
Escherichia coli Nissle 1917 0.80 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 ECOLIN_RS22140 Sec-independent protein translocase subunit TatC low > 55
Escherichia coli ECRC98 0.80 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.83 JDDGAC_17900 tatC Sec-independent protein translocase subunit TatC low > 86
Erwinia tracheiphila SCR3 0.79 LU632_RS14600 cupin domain-containing protein 0.83 LU632_RS23980 tatC Sec-independent protein translocase subunit TatC 0.60 27
Pantoea sp. MT58 0.76 IAI47_11940 cupin domain-containing protein 0.84 IAI47_18260 Sec-independent protein translocase subunit TatC — —
Shewanella oneidensis MR-1 0.43 SO2636 conserved hypothetical protein (NCBI ptt file) 0.69 SO4204 tatC Sec-independent periplasmic protein translocation protein TatC (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.42 Shewana3_1744 cupin 4 family protein (RefSeq) 0.64 Shewana3_3730 Sec-independent protein translocase TatC (RefSeq) low > 73
Shewanella loihica PV-4 0.41 Shew_1557 cupin 4 family protein (RefSeq) 0.65 Shew_3378 Sec-independent protein translocase, TatC subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.37 Sama_2065 cupin 4 (RefSeq) 0.60 Sama_3207 Sec-independent periplasmic protein translocation protein TatC (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.34 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase 0.65 MIT1002_00508 Sec-independent protein translocase protein TatC — —
Marinobacter adhaerens HP15 0.31 HP15_2089 cupin 4 family protein 0.57 HP15_3198 Sec-independent protein translocase, TatC subunit — —
Paraburkholderia graminis OAS925 0.27 ABIE53_002722 50S ribosomal protein L16 3-hydroxylase 0.51 ABIE53_003688 sec-independent protein translocase protein TatC low > 113
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00534 50S ribosomal protein L16 3-hydroxylase 0.51 H281DRAFT_05666 Sec-independent protein translocase TatC — —
Castellaniella sp019104865 MT123 0.25 ABCV34_RS00265 cupin domain-containing protein 0.49 ABCV34_RS11280 twin-arginine translocase subunit TatC — —
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS12490 cupin 0.49 BPHYT_RS17645 twin-arginine protein translocation system subunit TatC — —
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS06070 cupin domain-containing protein 0.50 QEN71_RS27800 twin-arginine translocase subunit TatC — —
Ralstonia solanacearum GMI1000 0.24 RS_RS05720 cupin domain-containing protein 0.44 RS_RS14730 twin-arginine translocase subunit TatC — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS14905 cupin domain-containing protein 0.45 RALBFv3_RS06785 twin-arginine translocase subunit TatC — —
Ralstonia solanacearum UW163 0.24 UW163_RS12375 cupin domain-containing protein 0.45 UW163_RS06830 twin-arginine translocase subunit TatC — —
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18455 cupin domain-containing protein 0.45 RPSI07_RS10450 twin-arginine translocase subunit TatC 0.46 9
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS06270 cupin 0.47 RR42_RS18850 preprotein translocase subunit TatC low > 128
Variovorax sp. SCN45 0.22 GFF2745 FIG074102: hypothetical protein 0.36 GFF5364 Twin-arginine translocation protein TatC — —
Variovorax sp. OAS795 0.21 ABID97_RS20150 cupin domain-containing protein 0.37 ABID97_RS23070 twin-arginine translocase subunit TatC — —

Not shown: 0 genomes with orthologs for HER17_RS11650 only; 52 genomes with orthologs for HER17_RS20585 only