Conservation of cofitness between HER17_RS00910 and HER17_RS19510 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00910 cystathionine gamma-synthase 1.0 HER17_RS19510 aspartate carbamoyltransferase 0.98 9
Dickeya dianthicola 67-19 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.91 HGI48_RS01900 aspartate carbamoyltransferase low > 71
Dickeya dadantii 3937 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.92 DDA3937_RS01925 aspartate carbamoyltransferase low > 74
Dickeya dianthicola ME23 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.91 DZA65_RS01970 aspartate carbamoyltransferase 0.87 23
Escherichia coli BW25113 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.88 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.70 74
Escherichia coli ECOR27 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.88 NOLOHH_04125 pyrB aspartate carbamoyltransferase low > 75
Klebsiella michiganensis M5al 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.88 BWI76_RS02995 aspartate carbamoyltransferase 0.51 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase 0.88 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit low > 73
Escherichia coli ECRC62 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.88 BNILDI_07385 pyrB aspartate carbamoyltransferase low > 75
Escherichia coli BL21 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.88 ECD_04113 aspartate carbamoyltransferase, catalytic subunit low > 61
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.88 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.88 ECOLIN_RS24625 aspartate carbamoyltransferase 0.66 46
Escherichia coli ECOR38 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.88 HEPCGN_10060 pyrB aspartate carbamoyltransferase low > 87
Escherichia fergusonii Becca 0.87 EFB2_04679 Cystathionine gamma-synthase 0.88 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit low > 86
Escherichia coli ECRC100 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.88 OKFHMN_11865 pyrB aspartate carbamoyltransferase low > 80
Escherichia coli ECRC99 0.87 KEDOAH_14485 metB cystathionine gamma-synthase 0.88 KEDOAH_16290 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC98 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.88 JDDGAC_15505 pyrB aspartate carbamoyltransferase low > 86
Enterobacter sp. TBS_079 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.88 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.83 54
Escherichia coli ECRC102 0.87 NIAGMN_11430 metB cystathionine gamma-synthase 0.88 NIAGMN_09715 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC101 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.88 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.67 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.87 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 78
Erwinia tracheiphila SCR3 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.85 LU632_RS20950 pyrB aspartate carbamoyltransferase low > 74
Serratia liquefaciens MT49 0.84 IAI46_24540 cystathionine gamma-synthase 0.89 IAI46_02275 aspartate carbamoyltransferase low > 86
Pantoea sp. MT58 0.79 IAI47_00880 cystathionine gamma-synthase 0.86 IAI47_16860 aspartate carbamoyltransferase 0.79 66
Rahnella sp. WP5 0.77 EX31_RS14215 cystathionine gamma-synthase 0.88 EX31_RS12785 aspartate carbamoyltransferase 0.93 57
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.73 CSW01_12725 aspartate carbamoyltransferase low > 62
Shewanella amazonensis SB2B 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.31 Sama_0840 aspartate carbamoyltransferase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) 0.34 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Shewanella loihica PV-4 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.31 Shew_1013 aspartate carbamoyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.33 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.87 65
Lysobacter sp. OAE881 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.22 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit low > 62
Shewanella oneidensis MR-1 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.33 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) low > 76
Rhodanobacter denitrificans MT42 0.57 LRK55_RS05085 cystathionine gamma-synthase 0.23 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit — —
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.23 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit — —
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1596.1 hypothetical protein 0.21 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.21 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit — —
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_01515 metB cystathionine gamma-synthase 0.22 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit — —
Sinorhizobium meliloti 1021 0.50 SMc02595 cystathionine gamma-synthase 0.22 SMc01360 aspartate carbamoyltransferase catalytic subunit low > 103
Acinetobacter radioresistens SK82 0.34 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.23 MPMX26_01099 Aspartate carbamoyltransferase low > 36
Dinoroseobacter shibae DFL-12 0.30 Dshi_1002 Cystathionine gamma-synthase (RefSeq) 0.21 Dshi_3091 aspartate carbamoyltransferase (RefSeq) low > 64

Not shown: 2 genomes with orthologs for HER17_RS00910 only; 55 genomes with orthologs for HER17_RS19510 only