Conservation of cofitness between HER17_RS12930 and HER17_RS18720 in Pectobacterium carotovorum WPP14

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12930 microcin C ABC transporter permease 1.0 HER17_RS18720 MFS transporter 0.53 16
Dickeya dianthicola 67-19 0.87 HGI48_RS09220 ABC transporter permease subunit 0.91 HGI48_RS02795 MFS transporter low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS09180 ABC transporter permease subunit 0.90 DDA3937_RS02820 MFS transporter low > 74
Dickeya dianthicola ME23 0.85 DZA65_RS09525 ABC transporter permease subunit 0.91 DZA65_RS02950 MFS transporter low > 75
Serratia liquefaciens MT49 0.79 IAI46_17325 ABC transporter permease subunit 0.91 IAI46_22225 MFS transporter low > 86
Escherichia coli BW25113 0.76 b2179 yejE predicted oligopeptide transporter subunit (NCBI) 0.83 b3093 exuT hexuronate transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.76 ECOLIN_RS12740 ABC transporter permease 0.83 ECOLIN_RS17835 hexuronate transporter ExuT — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF3757 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.49 GFF3092 Hexuronate transporter low > 78
Escherichia fergusonii Becca 0.76 EFB2_01677 Inner membrane ABC transporter permease protein YejE 0.83 EFB2_00719 Hexuronate transporter low > 86
Escherichia coli ECRC62 0.76 BNILDI_13875 yejE Inner membrane ABC transporter permease protein YejE 0.85 BNILDI_01200 exuT hexuronate transporter ExuT low > 75
Escherichia coli ECOR27 0.76 NOLOHH_14955 yejE Inner membrane ABC transporter permease protein YejE 0.85 NOLOHH_10315 exuT hexuronate transporter ExuT low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01530 Inner membrane ABC transporter permease protein YejE 0.83 OHPLBJKB_00609 Hexuronate transporter low > 73
Escherichia coli BL21 0.76 ECD_02109 microcin C ABC transporter permease 0.85 ECD_02962 hexuronate transporter low > 61
Escherichia coli ECRC99 0.76 KEDOAH_04805 yejE Inner membrane ABC transporter permease protein YejE 0.83 KEDOAH_09630 exuT hexuronate transporter ExuT — —
Escherichia coli ECRC102 0.76 NIAGMN_21145 yejE Inner membrane ABC transporter permease protein YejE 0.83 NIAGMN_16280 exuT hexuronate transporter ExuT — —
Escherichia coli ECRC101 0.76 MCAODC_14430 yejE Inner membrane ABC transporter permease protein YejE 0.83 MCAODC_09030 exuT hexuronate transporter ExuT low > 87
Escherichia coli ECOR38 0.76 HEPCGN_22645 yejE Inner membrane ABC transporter permease protein YejE 0.83 HEPCGN_17370 exuT hexuronate transporter ExuT low > 87
Escherichia coli ECRC100 0.76 OKFHMN_23380 yejE Inner membrane ABC transporter permease protein YejE 0.83 OKFHMN_18515 exuT hexuronate transporter ExuT low > 80
Escherichia coli ECRC98 0.76 JDDGAC_27340 yejE Inner membrane ABC transporter permease protein YejE 0.83 JDDGAC_22150 exuT hexuronate transporter ExuT low > 86
Klebsiella michiganensis M5al 0.75 BWI76_RS19790 putative binding-protein-dependent transporter 0.86 BWI76_RS24735 MFS transporter low > 92
Enterobacter sp. TBS_079 0.74 MPMX20_03145 Inner membrane ABC transporter permease protein YejE 0.85 MPMX20_04002 Hexuronate transporter low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0382 ABC-type uncharacterized transport system, permease component 0.85 EX28DRAFT_3161 D-galactonate transporter low > 76
Rahnella sp. WP5 0.73 EX31_RS19140 ABC transporter permease subunit 0.88 EX31_RS12670 MFS transporter low > 89
Pantoea sp. MT58 0.69 IAI47_06605 ABC transporter permease subunit 0.88 IAI47_02905 MFS transporter low > 76
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.55 Psyr_0325 General substrate transporter:TonB box, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.55 Psyr_0325 General substrate transporter:TonB box, N-terminal low > 86
Azospirillum sp. SherDot2 0.64 MPMX19_02170 Inner membrane ABC transporter permease protein YejE 0.47 MPMX19_04854 Hexuronate transporter low > 112
Pseudomonas fluorescens SBW25 0.63 PFLU_RS12885 ABC transporter permease 0.20 PFLU_RS16770 MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS12885 ABC transporter permease 0.20 PFLU_RS16770 MFS transporter low > 109
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_24455 ABC transporter permease 0.57 AO356_14055 hexuronate transporter low > 104
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_4591 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.19 Pf1N1B4_5129 D-galacturonate transporter ExuT (from data) — —
Pseudomonas simiae WCS417 0.61 PS417_12195 ABC transporter permease 0.20 PS417_14775 major facilitator transporter low > 88
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_00562 microcin C transport system permease protein 0.57 H281DRAFT_05311 MFS transporter, ACS family, hexuronate transporter low > 103
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS07165 peptide ABC transporter permease 0.56 BPHYT_RS24120 hexuronate transporter ExuT low > 109
Paraburkholderia graminis OAS925 0.50 ABIE53_002548 microcin C transport system permease protein 0.56 ABIE53_006514 ACS family hexuronate transporter-like MFS transporter low > 113
Ralstonia solanacearum GMI1000 0.49 RS_RS05860 ABC transporter permease 0.55 RS_RS21110 MFS transporter low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18330 ABC transporter permease 0.55 RPSI07_RS03505 MFS transporter low > 81
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13375 peptide ABC transporter permease 0.58 RR42_RS11305 hexuronate transporter low > 128
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS15045 ABC transporter permease 0.55 RALBFv3_RS19710 MFS transporter low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS12515 ABC transporter permease 0.55 UW163_RS19465 MFS transporter — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS10690 ABC transporter permease 0.57 ABZR87_RS20305 MFS transporter low > 80
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS17135 peptide ABC transporter permease 0.55 HSERO_RS23010 D-galacturonate transporter ExuT (from data) low > 78
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS06180 ABC transporter permease 0.49 QEN71_RS08830 MFS transporter low > 153

Not shown: 25 genomes with orthologs for HER17_RS12930 only; 16 genomes with orthologs for HER17_RS18720 only