Conservation of cofitness between HER17_RS02600 and HER17_RS16020 in Pectobacterium carotovorum WPP14

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02600 protease modulator HflC 1.0 HER17_RS16020 branched-chain amino acid transport system II carrier protein 0.85 4
Dickeya dadantii 3937 0.82 DDA3937_RS18595 protease modulator HflC 0.89 DDA3937_RS05445 branched-chain amino acid transport system II carrier protein — —
Dickeya dianthicola 67-19 0.82 HGI48_RS18530 protease modulator HflC 0.89 HGI48_RS05505 branched-chain amino acid transport system II carrier protein low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS19665 protease modulator HflC 0.89 DZA65_RS05830 branched-chain amino acid transport system II carrier protein low > 75
Serratia liquefaciens MT49 0.81 IAI46_01640 protease modulator HflC 0.85 IAI46_04795 branched-chain amino acid transport system II carrier protein low > 86
Erwinia tracheiphila SCR3 0.79 LU632_RS02070 hflC protease modulator HflC 0.77 LU632_RS18890 brnQ branched-chain amino acid transport system II carrier protein low > 74
Pantoea sp. MT58 0.77 IAI47_02605 protease modulator HflC 0.82 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ low > 76
Rahnella sp. WP5 0.77 EX31_RS08805 protease modulator HflC 0.80 EX31_RS22065 branched-chain amino acid transport system II carrier protein low > 89
Escherichia fergusonii Becca 0.77 EFB2_04360 Modulator of FtsH protease HflC 0.79 EFB2_03656 Branched-chain amino acid transport system 2 carrier protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF828 HflC protein 0.79 GFF4299 Branched-chain amino acid transport system carrier protein low > 78
Escherichia coli ECOR38 0.77 HEPCGN_10470 hflC protease modulator HflC 0.79 HEPCGN_07175 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 87
Escherichia coli ECRC62 0.77 BNILDI_06985 hflC protease modulator HflC 0.79 BNILDI_22880 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 75
Escherichia coli ECRC99 0.77 KEDOAH_15915 hflC protease modulator HflC 0.79 KEDOAH_19430 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC102 0.77 NIAGMN_10090 hflC protease modulator HflC 0.79 NIAGMN_06590 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC101 0.77 MCAODC_02755 hflC protease modulator HflC 0.79 MCAODC_27760 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 87
Escherichia coli ECOR27 0.77 NOLOHH_04505 hflC protease modulator HflC 0.79 NOLOHH_01465 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_03867 Modulator of FtsH protease HflC 0.79 OHPLBJKB_03275 Branched-chain amino acid transport system 2 carrier protein low > 73
Escherichia coli ECRC98 0.77 JDDGAC_15880 hflC protease modulator HflC 0.79 JDDGAC_12190 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 86
Escherichia coli BW25113 0.77 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.79 b0401 brnQ predicted branched chain amino acid transporter (LIV-II) (NCBI) low > 76
Escherichia coli BL21 0.77 ECD_04042 HflB protease modulator specific for phage lambda cII repressor 0.79 ECD_00349 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val low > 61
Escherichia coli ECRC100 0.77 OKFHMN_12240 hflC protease modulator HflC 0.79 OKFHMN_08535 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 80
Escherichia coli Nissle 1917 0.77 ECOLIN_RS24245 protease modulator HflC 0.79 ECOLIN_RS02420 branched-chain amino acid transporter carrier protein BrnQ — —
Klebsiella michiganensis M5al 0.75 BWI76_RS02550 protease modulator HflC 0.79 BWI76_RS06240 branched-chain amino acid transport system 2 carrier protein BrnQ low > 92
Enterobacter sp. TBS_079 0.74 MPMX20_00456 Modulator of FtsH protease HflC 0.79 MPMX20_00988 Branched-chain amino acid transport system 2 carrier protein low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_3372 HflC protein 0.79 EX28DRAFT_2573 branched-chain amino acid uptake carrier low > 76
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_01850 protease modulator HflC 0.35 CSW01_03485 branched-chain amino acid transport system II carrier protein low > 62
Shewanella sp. ANA-3 0.48 Shewana3_0600 HflC protein (RefSeq) 0.34 Shewana3_3332 branched-chain amino acid transport system II carrier protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO0606 hflC hflC protein (NCBI ptt file) 0.33 SO0949 brnQ branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.46 Shew_0569 HflC protein (RefSeq) 0.37 Shew_0769 branched-chain amino acid transport system II carrier protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.45 Sama_3022 hflC protein (RefSeq) 0.35 Sama_2740 branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) low > 62
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_1409 HflC protein 0.66 Pf1N1B4_3686 Branched-chain amino acid transport system carrier protein — —
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_3611 HflC protein 0.67 Pf6N2E2_5860 Branched-chain amino acid transport system carrier protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_08640 membrane protease HflC 0.67 AO356_19720 branched-chain amino acid ABC transporter substrate-binding protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0575 protease FtsH subunit HflC 0.66 Psyr_2015 Branched-chain amino acid transport system II carrier protein low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0575 protease FtsH subunit HflC 0.66 Psyr_2015 Branched-chain amino acid transport system II carrier protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_13160 membrane protease HflC 0.66 AO353_01810 branched-chain amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens SBW25 0.31 PFLU_RS02585 protease modulator HflC 0.64 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS02585 protease modulator HflC 0.64 PFLU_RS08980 branched-chain amino acid transport system II carrier protein 0.36 93
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_151 HflC protein 0.67 PfGW456L13_4264 Branched-chain amino acid transport system carrier protein 0.32 80
Pseudomonas stutzeri RCH2 0.29 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs 0.52 Psest_2489 branched-chain amino acid uptake carrier — —
Pseudomonas putida KT2440 0.29 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.67 PP_4184 branched chain amino acid transporter low > 96
Pseudomonas sp. S08-1 0.29 OH686_09455 HflC protein 0.68 OH686_01945 branched-chain amino acid transport system II carrier protein low > 80
Pseudomonas simiae WCS417 0.29 PS417_02505 membane protease HflC 0.63 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein — —
Pseudomonas sp. RS175 0.28 PFR28_05124 Modulator of FtsH protease HflC 0.67 PFR28_03091 Branched-chain amino acid transport system 2 carrier protein 0.30 54

Not shown: 41 genomes with orthologs for HER17_RS02600 only; 3 genomes with orthologs for HER17_RS16020 only