Conservation of cofitness between HER17_RS11650 and HER17_RS14880 in Pectobacterium carotovorum WPP14

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11650 cupin domain-containing protein 1.0 HER17_RS14880 Tol-Pal system protein TolQ 0.65 16
Serratia liquefaciens MT49 0.84 IAI46_10385 cupin domain-containing protein 0.94 IAI46_06320 Tol-Pal system protein TolQ — —
Dickeya dianthicola ME23 0.83 DZA65_RS11890 cupin domain-containing protein 0.92 DZA65_RS06895 Tol-Pal system protein TolQ low > 75
Dickeya dianthicola 67-19 0.83 HGI48_RS11555 cupin domain-containing protein 0.92 HGI48_RS06545 Tol-Pal system protein TolQ low > 71
Dickeya dadantii 3937 0.83 DDA3937_RS11510 cupin domain-containing protein 0.93 DDA3937_RS06500 Tol-Pal system protein TolQ — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_1802 Uncharacterized conserved protein 0.91 EX28DRAFT_2254 TolQ protein — —
Rahnella sp. WP5 0.81 EX31_RS24550 cupin domain-containing protein 0.91 EX31_RS23480 Tol-Pal system protein TolQ low > 89
Klebsiella michiganensis M5al 0.81 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.91 BWI76_RS08520 colicin transporter TolQ — —
Enterobacter sp. TBS_079 0.80 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.91 MPMX20_01366 Tol-Pal system protein TolQ low > 85
Escherichia coli ECRC62 0.80 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 BNILDI_21250 tolQ Tol-Pal system protein TolQ low > 75
Escherichia coli BW25113 0.80 b1128 ycfD orf, hypothetical protein (VIMSS) 0.86 b0737 tolQ membrane spanning protein in TolA-TolQ-TolR complex (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3413 FIG002776: hypothetical protein 0.86 GFF4651 MotA/TolQ/ExbB proton channel family protein — —
Escherichia fergusonii Becca 0.80 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.86 EFB2_03369 Tol-Pal system protein TolQ low > 86
Escherichia coli ECRC100 0.80 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 OKFHMN_06820 tolQ Tol-Pal system protein TolQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.86 OHPLBJKB_02976 Protein TolQ low > 73
Escherichia coli Nissle 1917 0.80 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 ECOLIN_RS03925 Tol-Pal system protein TolQ low > 55
Escherichia coli ECRC102 0.80 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 NIAGMN_04870 tolQ Tol-Pal system protein TolQ — —
Escherichia coli ECOR38 0.80 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 HEPCGN_01450 tolQ Tol-Pal system protein TolQ low > 87
Escherichia coli ECRC98 0.80 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 JDDGAC_10475 tolQ Tol-Pal system protein TolQ low > 86
Escherichia coli ECRC99 0.80 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 KEDOAH_21145 tolQ Tol-Pal system protein TolQ — —
Escherichia coli ECRC101 0.80 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 MCAODC_26040 tolQ Tol-Pal system protein TolQ low > 87
Escherichia coli ECOR27 0.80 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.86 NOLOHH_23255 tolQ Tol-Pal system protein TolQ — —
Escherichia coli BL21 0.80 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.86 ECD_00697 membrane spanning protein in TolA-TolQ-TolR complex — —
Erwinia tracheiphila SCR3 0.79 LU632_RS14600 cupin domain-containing protein 0.91 LU632_RS16045 tolQ Tol-Pal system protein TolQ — —
Pantoea sp. MT58 0.76 IAI47_11940 cupin domain-containing protein 0.90 IAI47_13700 Tol-Pal system protein TolQ low > 76
Shewanella oneidensis MR-1 0.43 SO2636 conserved hypothetical protein (NCBI ptt file) 0.61 SO2751 MotA/TolQ/ExbB proton channel family protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.42 Shewana3_1744 cupin 4 family protein (RefSeq) 0.63 Shewana3_2534 MotA/TolQ/ExbB proton channel (RefSeq) — —
Shewanella loihica PV-4 0.41 Shew_1557 cupin 4 family protein (RefSeq) 0.64 Shew_1524 MotA/TolQ/ExbB proton channel (RefSeq) low > 60
Shewanella amazonensis SB2B 0.37 Sama_2065 cupin 4 (RefSeq) 0.54 Sama_2089 MotA/TolQ/ExbB proton channel (RefSeq) — —
Alteromonas macleodii MIT1002 0.34 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase 0.57 MIT1002_01335 Biopolymer transport protein ExbB — —
Marinobacter adhaerens HP15 0.31 HP15_2089 cupin 4 family protein 0.48 HP15_2038 MotA/TolQ/ExbB proton channel — —
Paraburkholderia graminis OAS925 0.27 ABIE53_002722 50S ribosomal protein L16 3-hydroxylase 0.43 ABIE53_000885 biopolymer transport protein TolQ low > 113
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00534 50S ribosomal protein L16 3-hydroxylase 0.43 H281DRAFT_04722 Cell division and transport-associated protein TolQ low > 103
Castellaniella sp019104865 MT123 0.25 ABCV34_RS00265 cupin domain-containing protein 0.44 ABCV34_RS09835 protein TolQ — —
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS12490 cupin 0.42 BPHYT_RS03710 protein tolQ — —
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS06070 cupin domain-containing protein 0.43 QEN71_RS26250 protein TolQ — —
Ralstonia solanacearum GMI1000 0.24 RS_RS05720 cupin domain-containing protein 0.44 RS_RS03685 protein TolQ — —
Ralstonia solanacearum UW163 0.24 UW163_RS12375 cupin domain-containing protein 0.47 UW163_RS00655 protein TolQ — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS14905 cupin domain-containing protein 0.47 RALBFv3_RS12910 protein TolQ — —
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18455 cupin domain-containing protein 0.47 RPSI07_RS20315 protein TolQ low > 81
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS06270 cupin 0.43 RR42_RS15475 protein tolQ low > 128
Variovorax sp. SCN45 0.22 GFF2745 FIG074102: hypothetical protein 0.42 GFF575 Tol-Pal system protein TolQ low > 127
Variovorax sp. OAS795 0.21 ABID97_RS20150 cupin domain-containing protein 0.40 ABID97_RS17970 protein TolQ low > 91

Not shown: 0 genomes with orthologs for HER17_RS11650 only; 49 genomes with orthologs for HER17_RS14880 only