Conservation of cofitness between HER17_RS00780 and HER17_RS12570 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00780 N-carbamoylputrescine amidase 1.0 HER17_RS12570 PQQ-dependent sugar dehydrogenase 0.62 3
Dickeya dadantii 3937 0.95 DDA3937_RS00850 N-carbamoylputrescine amidase 0.67 DDA3937_RS09390 PQQ-dependent sugar dehydrogenase low > 74
Dickeya dianthicola 67-19 0.94 HGI48_RS20525 N-carbamoylputrescine amidase 0.66 HGI48_RS09405 PQQ-dependent sugar dehydrogenase low > 71
Dickeya dianthicola ME23 0.94 DZA65_RS21570 N-carbamoylputrescine amidase 0.66 DZA65_RS09715 PQQ-dependent sugar dehydrogenase low > 75
Rahnella sp. WP5 0.90 EX31_RS21185 N-carbamoylputrescine amidase 0.58 EX31_RS09725 PQQ-dependent sugar dehydrogenase low > 89
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4933 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.59 Psyr_3771 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4933 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.59 Psyr_3771 conserved hypothetical protein low > 86
Pseudomonas stutzeri RCH2 0.65 Psest_4290 N-carbamoylputrescine amidase 0.60 Psest_2915 Glucose/sorbosone dehydrogenases low > 67
Azospirillum brasilense Sp245 0.65 AZOBR_RS08170 carbon-nitrogen family hydrolase 0.46 AZOBR_RS31355 putative glucose dehydrogenase precursor low > 97
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_1662 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4) 0.60 Pf1N1B4_4753 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) low > 87
Pseudomonas sp. RS175 0.64 PFR28_04896 N-carbamoyl-D-amino acid hydrolase 0.63 PFR28_01704 Aldose sugar dehydrogenase YliI low > 88
Azospirillum sp. SherDot2 0.63 MPMX19_01284 N-carbamoyl-D-amino acid hydrolase 0.38 MPMX19_04049 Aldose sugar dehydrogenase YliI low > 112
Pseudomonas sp. S08-1 0.63 OH686_11500 N-carbamoylputrescine amidase 0.61 OH686_05395 Soluble aldose sugar dehydrogenase, PQQ-dependent low > 80
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_2704 N-carbamoylputrescine amidase (3.5.1.53) 0.59 PfGW456L13_3029 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) low > 87
Caulobacter crescentus NA1000 0.53 CCNA_00212 N-carbamoylputrescine amidase 0.39 CCNA_01575 glucose / sorbosone dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_00212 N-carbamoylputrescine amidase 0.39 CCNA_01575 glucose / sorbosone dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.52 A4249_RS11135 N-carbamoylputrescine amidase 0.39 A4249_RS12595 PQQ-dependent sugar dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_1979 N-carbamoylputrescine amidase 0.28 Ga0059261_2152 Glucose/sorbosone dehydrogenases — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS18075 carbon-nitrogen hydrolase 0.37 ABZR88_RS09030 PQQ-dependent sugar dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS15465 acyltransferase 0.36 CA265_RS03100 glucose dehydrogenase — —
Marinobacter adhaerens HP15 0.37 HP15_2074 carbon-nitrogen hydrolase family protein 0.39 HP15_835 secreted protein containing glucose sorbosone dehydrogenase domain low > 73
Lysobacter sp. OAE881 0.33 ABIE51_RS09320 carbon-nitrogen hydrolase 0.53 ABIE51_RS09195 PQQ-dependent sugar dehydrogenase — —
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_2145 hypothetical protein 0.33 Synpcc7942_1791 hypothetical protein low > 38
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.2374.1 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4) 0.28 Xcc-8004.4823.1 PQQ-dependent oxidoreductase, gdhB family — —
Alteromonas macleodii MIT1002 0.32 MIT1002_03761 N-carbamoyl-D-amino acid hydrolase 0.36 MIT1002_00526 Soluble aldose sugar dehydrogenase YliI precursor low > 70
Sinorhizobium meliloti 1021 0.17 SMc02442 hydrolase 0.38 SM_b20301 dehydgrogenase low > 103
Bosea sp. OAE506 0.17 ABIE41_RS22010 N-carbamoyl-D-amino-acid hydrolase 0.43 ABIE41_RS11820 PQQ-dependent sugar dehydrogenase low > 77
Pseudomonas fluorescens SBW25 0.17 PFLU_RS27560 carbon-nitrogen hydrolase family protein 0.59 PFLU_RS14200 PQQ-dependent sugar dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS27560 carbon-nitrogen hydrolase family protein 0.59 PFLU_RS14200 PQQ-dependent sugar dehydrogenase low > 109
Pseudomonas putida KT2440 0.16 PP_0382 5-aminopentanamidase 0.63 PP_2198 aldose sugar dehydrogenase low > 96
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_14225 5-aminopentanamidase (EC 3.5.1.30) (from data) 0.62 AO356_27715 oxidoreductase low > 104
Pseudomonas simiae WCS417 0.16 PS417_25915 carbon-nitrogen hydrolase 0.60 PS417_13140 oxidoreductase low > 88
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_4777 5-aminopentanamidase (EC 3.5.1.30) (from data) 0.62 Pf6N2E2_801 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) low > 103
Castellaniella sp019104865 MT123 0.15 ABCV34_RS08035 N-carbamoyl-D-amino-acid hydrolase 0.29 ABCV34_RS14665 PQQ-dependent sugar dehydrogenase low > 48
Agrobacterium fabrum C58 0.14 Atu3510 amidohydrolase 0.36 Atu4037 glucose dehydrogenase low > 89

Not shown: 17 genomes with orthologs for HER17_RS00780 only; 29 genomes with orthologs for HER17_RS12570 only