Conservation of cofitness between HER17_RS00910 and HER17_RS12235 in Pectobacterium carotovorum WPP14

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00910 cystathionine gamma-synthase 1.0 HER17_RS12235 histidinol-phosphate transaminase 0.98 8
Dickeya dianthicola 67-19 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.80 HGI48_RS09740 histidinol-phosphate transaminase 0.78 57
Dickeya dadantii 3937 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.80 DDA3937_RS09730 histidinol-phosphate transaminase 0.97 3
Dickeya dianthicola ME23 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.81 DZA65_RS10050 histidinol-phosphate transaminase 0.77 50
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase 0.73 OHPLBJKB_01679 Histidinol-phosphate aminotransferase low > 73
Escherichia coli ECRC62 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.73 BNILDI_14735 hisC histidinol-phosphate transaminase 0.97 18
Escherichia coli ECOR27 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.74 NOLOHH_15825 hisC histidinol-phosphate transaminase 0.88 58
Escherichia coli BW25113 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.74 b2021 hisC histidinol-phosphate aminotransferase (NCBI) 0.88 29
Klebsiella michiganensis M5al 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.74 BWI76_RS18930 histidinol-phosphate transaminase 0.86 36
Escherichia coli BL21 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.74 ECD_01923 histidinol-phosphate aminotransferase 0.83 29
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.73 ECOLIN_RS11950 histidinol-phosphate transaminase — —
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.74 EX28DRAFT_0538 histidinol-phosphate aminotransferase 0.88 16
Escherichia coli ECOR38 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.74 HEPCGN_03215 hisC histidinol-phosphate transaminase 0.93 35
Escherichia fergusonii Becca 0.87 EFB2_04679 Cystathionine gamma-synthase 0.74 EFB2_01835 Histidinol-phosphate aminotransferase low > 86
Escherichia coli ECRC100 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.74 OKFHMN_24510 hisC histidinol-phosphate transaminase 0.91 56
Escherichia coli ECRC99 0.87 KEDOAH_14485 metB cystathionine gamma-synthase 0.74 KEDOAH_03640 hisC histidinol-phosphate transaminase — —
Enterobacter sp. TBS_079 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.75 MPMX20_03003 Histidinol-phosphate aminotransferase 0.93 18
Escherichia coli ECRC102 0.87 NIAGMN_11430 metB cystathionine gamma-synthase 0.74 NIAGMN_22455 hisC histidinol-phosphate transaminase — —
Escherichia coli ECRC101 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.74 MCAODC_20430 hisC histidinol-phosphate transaminase 0.91 22
Escherichia coli ECRC98 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.74 JDDGAC_28620 hisC histidinol-phosphate transaminase 0.93 27
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.74 GFF3911 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 78
Erwinia tracheiphila SCR3 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.73 LU632_RS08940 hisC histidinol-phosphate transaminase low > 74
Serratia liquefaciens MT49 0.84 IAI46_24540 cystathionine gamma-synthase 0.79 IAI46_08205 histidinol-phosphate transaminase low > 86
Pantoea sp. MT58 0.79 IAI47_00880 cystathionine gamma-synthase 0.75 IAI47_07085 histidinol-phosphate transaminase 0.99 3
Rahnella sp. WP5 0.77 EX31_RS14215 cystathionine gamma-synthase 0.75 EX31_RS11445 histidinol-phosphate transaminase 0.96 29
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.58 CSW01_05755 histidinol-phosphate transaminase low > 62
Shewanella amazonensis SB2B 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.33 Sama_1943 histidinol-phosphate aminotransferase (RefSeq) 0.97 13
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) 0.20 B158DRAFT_2325 histidinol-phosphate aminotransferase low > 40
Shewanella loihica PV-4 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.42 Shew_2199 histidinol-phosphate aminotransferase (RefSeq) 0.94 32
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.43 Shewana3_1852 histidinol phosphate aminotransferase (RefSeq) 0.94 13
Lysobacter sp. OAE881 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.32 ABIE51_RS13320 histidinol-phosphate transaminase 0.94 39
Shewanella oneidensis MR-1 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.43 SO2072 hisC histidinol-phosphate aminotransferase (NCBI ptt file) 0.96 12
Rhodanobacter denitrificans MT42 0.57 LRK55_RS05085 cystathionine gamma-synthase 0.38 LRK55_RS01380 histidinol-phosphate transaminase low > 63
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS16160 cystathionine gamma-synthase 0.17 A4249_RS11450 histidinol-phosphate transaminase low > 48
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.39 LRK54_RS01600 histidinol-phosphate transaminase 0.54 43
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1596.1 hypothetical protein 0.35 Xcc-8004.2947.1 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.58 74
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.34 ABZR86_RS06725 histidinol-phosphate transaminase 0.94 33
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_01515 metB cystathionine gamma-synthase 0.39 OKGIIK_04955 hisC histidinol-phosphate transaminase low > 52
Sinorhizobium meliloti 1021 0.50 SMc02595 cystathionine gamma-synthase 0.15 SMc00710 histidinol-phosphate aminotransferase low > 103
Acinetobacter radioresistens SK82 0.34 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.16 MPMX26_02586 Histidinol-phosphate aminotransferase 0.88 20
Variovorax sp. OAS795 0.30 ABID97_RS21630 O-succinylhomoserine sulfhydrylase 0.18 ABID97_RS23145 histidinol-phosphate transaminase — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1002 Cystathionine gamma-synthase (RefSeq) 0.16 Dshi_2946 histidinol-phosphate aminotransferase (RefSeq) — —

Not shown: 0 genomes with orthologs for HER17_RS00910 only; 58 genomes with orthologs for HER17_RS12235 only