Conservation of cofitness between HER17_RS00910 and HER17_RS12230 in Pectobacterium carotovorum WPP14

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00910 cystathionine gamma-synthase 1.0 HER17_RS12230 histidinol dehydrogenase 0.97 14
Dickeya dianthicola 67-19 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.84 HGI48_RS09745 histidinol dehydrogenase low > 71
Dickeya dadantii 3937 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.84 DDA3937_RS09735 histidinol dehydrogenase 0.96 9
Dickeya dianthicola ME23 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.83 DZA65_RS10055 histidinol dehydrogenase 0.88 20
Escherichia coli BW25113 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.80 b2020 hisD histidinol dehydrogenase (NCBI) 0.88 24
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase 0.80 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Klebsiella michiganensis M5al 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.79 BWI76_RS18925 histidinol dehydrogenase 0.87 34
Escherichia coli ECOR27 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.80 NOLOHH_15830 hisD Histidinol dehydrogenase 0.89 48
Escherichia coli ECRC62 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.80 BNILDI_14740 hisD Histidinol dehydrogenase 0.97 16
Escherichia coli BL21 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.81 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 0.88 20
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.80 EX28DRAFT_0539 histidinol dehydrogenase 0.90 14
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.81 ECOLIN_RS11945 histidinol dehydrogenase — —
Escherichia coli ECOR38 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.81 HEPCGN_03220 hisD Histidinol dehydrogenase 0.95 18
Escherichia fergusonii Becca 0.87 EFB2_04679 Cystathionine gamma-synthase 0.81 EFB2_01836 Histidinol dehydrogenase low > 86
Escherichia coli ECRC98 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.80 JDDGAC_28625 hisD Histidinol dehydrogenase 0.97 11
Escherichia coli ECRC100 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.80 OKFHMN_24515 hisD Histidinol dehydrogenase 0.85 77
Escherichia coli ECRC102 0.87 NIAGMN_11430 metB cystathionine gamma-synthase 0.80 NIAGMN_22460 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC99 0.87 KEDOAH_14485 metB cystathionine gamma-synthase 0.80 KEDOAH_03635 hisD Histidinol dehydrogenase — —
Enterobacter sp. TBS_079 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.79 MPMX20_03002 Histidinol dehydrogenase 0.94 11
Escherichia coli ECRC101 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.80 MCAODC_20425 hisD Histidinol dehydrogenase 0.91 26
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.80 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Erwinia tracheiphila SCR3 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.75 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Serratia liquefaciens MT49 0.84 IAI46_24540 cystathionine gamma-synthase 0.82 IAI46_08210 histidinol dehydrogenase low > 86
Pantoea sp. MT58 0.79 IAI47_00880 cystathionine gamma-synthase 0.79 IAI47_07090 histidinol dehydrogenase 0.98 6
Rahnella sp. WP5 0.77 EX31_RS14215 cystathionine gamma-synthase 0.81 EX31_RS11440 histidinol dehydrogenase 0.95 33
Shewanella amazonensis SB2B 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.54 Sama_1942 hisD histidinol dehydrogenase (RefSeq) 0.96 24
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.63 CSW01_05750 histidinol dehydrogenase low > 62
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) 0.26 B158DRAFT_2293 histidinol dehydrogenase low > 40
Shewanella loihica PV-4 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.55 Shew_2198 histidinol dehydrogenase (RefSeq) 0.92 39
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.54 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) 0.93 24
Shewanella oneidensis MR-1 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.53 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) 0.96 14
Lysobacter sp. OAE881 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.49 ABIE51_RS13325 histidinol dehydrogenase 0.97 16
Rhodanobacter denitrificans MT42 0.57 LRK55_RS05085 cystathionine gamma-synthase 0.51 LRK55_RS01385 histidinol dehydrogenase low > 63
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS16160 cystathionine gamma-synthase 0.36 A4249_RS10695 histidinol dehydrogenase 0.99 11
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.51 LRK54_RS01605 histidinol dehydrogenase 0.68 17
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.51 ABZR86_RS06730 histidinol dehydrogenase 0.95 22
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1596.1 hypothetical protein 0.49 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23) low > 74
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_01515 metB cystathionine gamma-synthase 0.51 OKGIIK_04950 hisD histidinol dehydrogenase low > 52
Sinorhizobium meliloti 1021 0.50 SMc02595 cystathionine gamma-synthase 0.35 SMc02307 histidinol dehydrogenase low > 103
Acinetobacter radioresistens SK82 0.34 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.32 MPMX26_02587 Histidinol dehydrogenase 0.88 22
Variovorax sp. OAS795 0.30 ABID97_RS21630 O-succinylhomoserine sulfhydrylase 0.32 ABID97_RS23160 histidinol dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1002 Cystathionine gamma-synthase (RefSeq) 0.33 Dshi_0979 Histidinol dehydrogenase (RefSeq) — —

Not shown: 0 genomes with orthologs for HER17_RS00910 only; 60 genomes with orthologs for HER17_RS12230 only