Conservation of cofitness between HER17_RS00910 and HER17_RS10935 in Pectobacterium carotovorum WPP14

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00910 cystathionine gamma-synthase 1.0 HER17_RS10935 tryptophan synthase subunit beta 0.97 13
Dickeya dianthicola 67-19 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.94 HGI48_RS10465 tryptophan synthase subunit beta low > 71
Dickeya dadantii 3937 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.94 DDA3937_RS10465 tryptophan synthase subunit beta low > 74
Dickeya dianthicola ME23 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.94 DZA65_RS10945 tryptophan synthase subunit beta low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase 0.92 OHPLBJKB_02422 Tryptophan synthase beta chain low > 73
Escherichia coli ECOR27 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.92 NOLOHH_20330 trpB tryptophan synthase subunit beta 0.90 44
Escherichia coli BW25113 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.92 b1261 trpB tryptophan synthase subunit beta (NCBI) 0.82 50
Klebsiella michiganensis M5al 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.92 BWI76_RS11845 tryptophan synthase subunit beta 0.90 22
Escherichia coli ECRC62 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.92 BNILDI_18475 trpB tryptophan synthase subunit beta 0.93 49
Escherichia coli BL21 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.91 ECD_01235 tryptophan synthase, beta subunit 0.72 50
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.92 ECOLIN_RS07600 tryptophan synthase subunit beta 0.86 23
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.93 EX28DRAFT_0933 tryptophan synthase, beta subunit low > 76
Escherichia coli ECOR38 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.92 HEPCGN_25520 trpB tryptophan synthase subunit beta 0.86 59
Escherichia fergusonii Becca 0.87 EFB2_04679 Cystathionine gamma-synthase 0.92 EFB2_02665 Tryptophan synthase beta chain low > 86
Escherichia coli ECRC100 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.92 OKFHMN_02670 trpB tryptophan synthase subunit beta 0.87 68
Escherichia coli ECRC99 0.87 KEDOAH_14485 metB cystathionine gamma-synthase 0.92 KEDOAH_26080 trpB tryptophan synthase subunit beta — —
Escherichia coli ECRC98 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.92 JDDGAC_05215 trpB tryptophan synthase subunit beta 0.93 28
Escherichia coli ECRC102 0.87 NIAGMN_11430 metB cystathionine gamma-synthase 0.92 NIAGMN_26840 trpB tryptophan synthase subunit beta — —
Enterobacter sp. TBS_079 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.92 MPMX20_02513 Tryptophan synthase beta chain 0.91 28
Escherichia coli ECRC101 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.92 MCAODC_15595 trpB tryptophan synthase subunit beta 0.81 56
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.93 GFF2725 Tryptophan synthase beta chain (EC 4.2.1.20) low > 78
Erwinia tracheiphila SCR3 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.91 LU632_RS12770 trpB tryptophan synthase subunit beta low > 74
Serratia liquefaciens MT49 0.84 IAI46_24540 cystathionine gamma-synthase 0.94 IAI46_14040 tryptophan synthase subunit beta low > 86
Pantoea sp. MT58 0.79 IAI47_00880 cystathionine gamma-synthase 0.92 IAI47_09170 tryptophan synthase subunit beta 0.95 26
Rahnella sp. WP5 0.77 EX31_RS14215 cystathionine gamma-synthase 0.92 EX31_RS09975 tryptophan synthase subunit beta 0.97 19
Shewanella amazonensis SB2B 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.80 Sama_2133 tryptophan synthase subunit beta (RefSeq) 0.91 51
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.85 CSW01_05930 tryptophan synthase subunit beta low > 62
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) 0.62 B158DRAFT_2429 tryptophan synthase, beta subunit low > 40
Shewanella loihica PV-4 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.82 Shew_2255 tryptophan synthase subunit beta (RefSeq) 0.91 42
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.81 Shewana3_1516 tryptophan synthase subunit beta (RefSeq) 0.92 26
Lysobacter sp. OAE881 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.53 ABIE51_RS08260 tryptophan synthase subunit beta low > 62
Shewanella oneidensis MR-1 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.81 SO3023 trpB tryptophan synthase, beta subunit (NCBI ptt file) 0.90 50
Rhodanobacter denitrificans MT42 0.57 LRK55_RS05085 cystathionine gamma-synthase 0.52 LRK55_RS01465 tryptophan synthase subunit beta low > 63
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS16160 cystathionine gamma-synthase 0.51 A4249_RS11330 tryptophan synthase subunit beta — —
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.52 LRK54_RS01685 tryptophan synthase subunit beta low > 59
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1596.1 hypothetical protein 0.52 Xcc-8004.1964.1 Tryptophan synthase beta chain (EC 4.2.1.20) low > 74
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.54 ABZR86_RS08000 tryptophan synthase subunit beta 0.92 45
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_01515 metB cystathionine gamma-synthase 0.53 OKGIIK_04845 trpB tryptophan synthase subunit beta low > 52
Sinorhizobium meliloti 1021 0.50 SMc02595 cystathionine gamma-synthase 0.56 SMc02766 tryptophan synthase subunit beta low > 103
Acinetobacter radioresistens SK82 0.34 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.52 MPMX26_02617 Tryptophan synthase beta chain 0.93 4
Variovorax sp. OAS795 0.30 ABID97_RS21630 O-succinylhomoserine sulfhydrylase 0.54 ABID97_RS08430 tryptophan synthase subunit beta — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1002 Cystathionine gamma-synthase (RefSeq) 0.54 Dshi_1031 tryptophan synthase, beta subunit (RefSeq) — —

Not shown: 0 genomes with orthologs for HER17_RS00910 only; 60 genomes with orthologs for HER17_RS10935 only