Conservation of cofitness between HER17_RS08615 and HER17_RS08555 in Pectobacterium carotovorum WPP14

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC 1.0 HER17_RS08555 glucans biosynthesis glucosyltransferase MdoH 0.87 1
Rahnella sp. WP5 0.85 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.73 EX31_RS24255 glucans biosynthesis glucosyltransferase MdoH low > 89
Dickeya dianthicola ME23 0.84 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.80 DZA65_RS13750 glucans biosynthesis glucosyltransferase MdoH low > 75
Dickeya dianthicola 67-19 0.84 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.80 HGI48_RS13275 glucans biosynthesis glucosyltransferase MdoH low > 71
Dickeya dadantii 3937 0.84 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.81 DDA3937_RS13215 glucans biosynthesis glucosyltransferase MdoH low > 74
Serratia liquefaciens MT49 0.83 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 IAI46_09610 glucans biosynthesis glucosyltransferase MdoH low > 86
Klebsiella michiganensis M5al 0.83 BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase 0.72 BWI76_RS10935 glucan biosynthesis glucosyltransferase H low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.73 GFF3329 Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-) 0.77 70
Enterobacter asburiae PDN3 0.82 EX28DRAFT_1844 pseudouridine synthase, RluA family 0.73 EX28DRAFT_1881 Membrane glycosyltransferase low > 76
Pantoea sp. MT58 0.82 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 IAI47_12275 glucans biosynthesis glucosyltransferase MdoH low > 76
Escherichia coli BL21 0.82 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase 0.72 ECD_01046 OPG biosynthetic ACP-dependent transmembrane UDP-glucose beta-1,2 glycosyltransferase; nutrient-dependent cell size regulator, FtsZ assembly antagonist low > 61
Escherichia coli ECOR27 0.82 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 NOLOHH_21325 mdoH glucans biosynthesis glucosyltransferase MdoH 0.64 66
Escherichia coli ECRC62 0.82 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 BNILDI_19485 mdoH glucans biosynthesis glucosyltransferase MdoH low > 75
Escherichia coli BW25113 0.82 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) 0.72 b1049 mdoH glucosyltransferase MdoH (NCBI) low > 76
Escherichia coli ECOR38 0.82 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 HEPCGN_23695 mdoH glucans biosynthesis glucosyltransferase MdoH 0.92 40
Escherichia coli ECRC100 0.82 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 OKFHMN_03795 mdoH glucans biosynthesis glucosyltransferase MdoH low > 80
Escherichia fergusonii Becca 0.82 EFB2_02889 Ribosomal large subunit pseudouridine synthase C 0.72 EFB2_02924 Glucans biosynthesis glucosyltransferase H 0.57 30
Escherichia coli ECRC99 0.82 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 KEDOAH_23960 mdoH glucans biosynthesis glucosyltransferase MdoH — —
Escherichia coli ECRC98 0.82 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 JDDGAC_07455 mdoH glucans biosynthesis glucosyltransferase MdoH low > 86
Escherichia coli ECRC101 0.82 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 MCAODC_23155 mdoH glucans biosynthesis glucosyltransferase MdoH low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C 0.72 OHPLBJKB_02615 Glucans biosynthesis glucosyltransferase H low > 73
Escherichia coli ECRC102 0.82 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 NIAGMN_24035 mdoH glucans biosynthesis glucosyltransferase MdoH — —
Escherichia coli Nissle 1917 0.81 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 ECOLIN_RS06095 glucans biosynthesis glucosyltransferase MdoH low > 55
Enterobacter sp. TBS_079 0.80 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C 0.73 MPMX20_01730 Glucans biosynthesis glucosyltransferase H low > 85
Erwinia tracheiphila SCR3 0.79 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.72 LU632_RS10275 mdoH glucans biosynthesis glucosyltransferase MdoH low > 74
Pseudomonas stutzeri RCH2 0.57 Psest_1680 pseudouridine synthase, RluA family 0.58 Psest_1577 Membrane glycosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.62 Pf6N2E2_3791 Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-) 0.50 1
Pseudomonas sp. RS175 0.56 PFR28_03018 Ribosomal large subunit pseudouridine synthase C 0.63 PFR28_04979 Glucans biosynthesis glucosyltransferase H low > 88
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1639 ribosomal large subunit pseudouridine synthase C 0.61 Psyr_0378 Glycosyl transferase, family 2 low > 86
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_20125 23S rRNA pseudouridylate synthase 0.63 AO356_09560 glucosyltransferase MdoH low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1639 ribosomal large subunit pseudouridine synthase C 0.61 Psyr_0378 Glycosyl transferase, family 2 low > 86
Pseudomonas putida KT2440 0.55 PP_1906 ribosomal large subunit pseudouridine synthase C 0.62 PP_5025 Glucans biosynthesis glucosyltransferase H low > 96
Pseudomonas simiae WCS417 0.55 PS417_21480 23S rRNA pseudouridylate synthase 0.62 PS417_01795 glucosyltransferase MdoH low > 88
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.62 PFLU_RS01840 glucans biosynthesis glucosyltransferase MdoH low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.62 PFLU_RS01840 glucans biosynthesis glucosyltransferase MdoH low > 109
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_01405 23S rRNA pseudouridylate synthase 0.61 AO353_12315 glucosyltransferase MdoH low > 101
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.62 Pf1N1B4_1572 Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-) — —
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.62 PfGW456L13_310 Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-) 0.35 45
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C 0.46 HSERO_RS17265 glucosyltransferase MdoH low > 78
Ralstonia solanacearum UW163 0.46 UW163_RS11840 RluA family pseudouridine synthase 0.49 UW163_RS07005 glucans biosynthesis glucosyltransferase MdoH — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS14375 RluA family pseudouridine synthase 0.49 RALBFv3_RS06620 glucans biosynthesis glucosyltransferase MdoH low > 76
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS14155 pseudouridine synthase 0.48 RR42_RS28930 glucosyltransferase MdoH low > 128
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS10090 RluA family pseudouridine synthase 0.49 ABZR87_RS02290 glucans biosynthesis glucosyltransferase MdoH low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS05155 RluA family pseudouridine synthase 0.50 RS_RS14570 glucan biosynthesis protein H low > 80
Ralstonia solanacearum PSI07 0.45 RPSI07_RS19085 RluA family pseudouridine synthase 0.50 RPSI07_RS10605 glucans biosynthesis glucosyltransferase MdoH low > 81

Not shown: 38 genomes with orthologs for HER17_RS08615 only; 0 genomes with orthologs for HER17_RS08555 only