Conservation of cofitness between HER17_RS11350 and HER17_RS08185 in Pectobacterium carotovorum WPP14

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11350 23S rRNA (guanine(745)-N(1))-methyltransferase 1.0 HER17_RS08185 flagellar basal body rod protein FlgF 0.74 6
Dickeya dadantii 3937 0.64 DDA3937_RS11305 23S rRNA (guanine(745)-N(1))-methyltransferase 0.78 DDA3937_RS13460 flagellar basal body rod protein FlgF low > 74
Dickeya dianthicola 67-19 0.64 HGI48_RS11340 23S rRNA (guanine(745)-N(1))-methyltransferase 0.77 HGI48_RS13505 flagellar basal body rod protein FlgF low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS11685 23S rRNA (guanine(745)-N(1))-methyltransferase 0.77 DZA65_RS13990 flagellar basal body rod protein FlgF low > 75
Serratia liquefaciens MT49 0.61 IAI46_14835 23S rRNA (guanine(745)-N(1))-methyltransferase 0.75 IAI46_15940 flagellar basal body rod protein FlgF low > 86
Rahnella sp. WP5 0.61 EX31_RS24675 23S rRNA (guanine(745)-N(1))-methyltransferase 0.66 EX31_RS11295 flagellar basal body rod protein FlgF low > 89
Enterobacter sp. TBS_079 0.60 MPMX20_02727 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 MPMX20_01756 Flagellar basal-body rod protein FlgF low > 85
Enterobacter asburiae PDN3 0.59 EX28DRAFT_0737 Methyltransferase domain 0.72 EX28DRAFT_1855 flagellar hook-basal body protein low > 76
Escherichia coli Nissle 1917 0.57 ECOLIN_RS10140 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 ECOLIN_RS06235 flagellar basal-body rod protein FlgF — —
Escherichia fergusonii Becca 0.57 EFB2_02178 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 EFB2_02897 Flagellar basal-body rod protein FlgF low > 86
Escherichia coli ECRC62 0.57 BNILDI_15805 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 BNILDI_19345 flgF flagellar basal-body rod protein FlgF low > 75
Escherichia coli BW25113 0.57 b1822 rrmA 23S rRNA m1G745 methyltransferase (NCBI) 0.72 b1077 flgF flagellar component of cell-proximal portion of basal-body rod (NCBI) low > 76
Escherichia coli ECOR38 0.57 HEPCGN_04900 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 HEPCGN_23835 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli BL21 0.57 ECD_01792 23S rRNA m(1)G745 methyltransferase, SAM-dependent 0.72 ECD_01073 flagellar component of cell-proximal portion of basal-body rod — —
Escherichia coli ECRC101 0.56 MCAODC_18905 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 MCAODC_23015 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli ECRC98 0.56 JDDGAC_01075 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 JDDGAC_07315 flgF flagellar basal-body rod protein FlgF low > 86
Escherichia coli ECRC99 0.56 KEDOAH_01605 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 KEDOAH_24100 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli ECRC102 0.56 NIAGMN_01560 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 NIAGMN_24175 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli ECRC100 0.56 OKFHMN_26500 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 OKFHMN_03655 flgF flagellar basal-body rod protein FlgF low > 80
Escherichia coli ECOR27 0.56 NOLOHH_17025 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 NOLOHH_21185 flgF flagellar basal-body rod protein FlgF low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF2836 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.72 GFF3358 Flagellar basal-body rod protein FlgF low > 78
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_10000 23S rRNA (guanine(745)-N(1))-methyltransferase 0.32 CSW01_11205 flagellar basal-body rod protein FlgF low > 62
Pantoea sp. MT58 0.53 IAI47_08750 23S rRNA (guanine(745)-N(1))-methyltransferase 0.72 IAI47_12145 flagellar basal body rod protein FlgF low > 76
Erwinia tracheiphila SCR3 0.52 LU632_RS13200 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.78 LU632_RS10415 flagellar basal body rod protein FlgF low > 74
Shewanella sp. ANA-3 0.43 Shewana3_2570 rrmA 23S rRNA methyltransferase A (RefSeq) 0.36 Shewana3_1325 flgF flagellar basal body rod protein FlgF (RefSeq) low > 73
Shewanella oneidensis MR-1 0.42 SO2788 rrmA ribosomal RNA large subunit methyltransferase A (NCBI ptt file) 0.37 SO3245 flgF flagellar basal-body rod protein FlgF (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.41 Shew_1613 rrmA 23S rRNA methyltransferase A (RefSeq) 0.36 Shew_1349 flgF flagellar basal body rod protein FlgF (RefSeq) low > 60
Shewanella amazonensis SB2B 0.39 Sama_1971 rrmA 23S rRNA methyltransferase A (RefSeq) 0.36 Sama_2314 flgF flagellar basal body rod protein FlgF (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.33 MIT1002_01980 23S rRNA (guanine(745)-N(1))-methyltransferase 0.41 MIT1002_01043 Putative proximal rod protein low > 70
Pseudomonas putida KT2440 0.31 PP_1524 23S rRNA m1G745 methyltransferase 0.34 PP_4386 flagellar basal-body rod protein FlgF low > 96
Pseudomonas stutzeri RCH2 0.31 Psest_1617 Methylase involved in ubiquinone/menaquinone biosynthesis 0.37 Psest_2964 flagellar basal-body rod protein FlgF low > 67
Pseudomonas sp. S08-1 0.31 OH686_06565 23S rRNA (guanine(745)-N(1))-methyltransferase 0.36 OH686_02955 Flagellar basal-body rod protein FlgF low > 80
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_4722 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.34 PfGW456L13_4387 Flagellar basal-body rod protein FlgF low > 87
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 0.38 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 0.38 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_16405 SAM-dependent methyltransferase 0.33 AO353_18595 flagellar biosynthesis protein FlgF low > 101
Pseudomonas sp. RS175 0.29 PFR28_00385 23S rRNA (guanine(745)-N(1))-methyltransferase 0.33 PFR28_00804 Flagellar basal-body rod protein FlgF low > 88
Pseudomonas simiae WCS417 0.29 PS417_06150 SAM-dependent methlyltransferase 0.35 PS417_19890 flagellar basal body rod protein FlgF — —
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3070 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.34 Pf1N1B4_3568 Flagellar basal-body rod protein FlgF — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3084 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.33 Pf6N2E2_2628 Flagellar basal-body rod protein FlgF low > 103
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_06095 SAM-dependent methyltransferase 0.33 AO356_03930 flagellar biosynthesis protein FlgF low > 104
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS06215 methyltransferase domain-containing protein 0.34 PFLU_RS21860 flagellar basal body rod protein FlgF 0.13 76
Pseudomonas fluorescens SBW25 0.28 PFLU_RS06215 methyltransferase domain-containing protein 0.34 PFLU_RS21860 flagellar basal body rod protein FlgF low > 109
Marinobacter adhaerens HP15 0.27 HP15_1754 rRNA (guanine-N1-)-methyltransferase A, predicted 0.35 HP15_1471 flagellar basal-body rod FlgF low > 73

Not shown: 3 genomes with orthologs for HER17_RS11350 only; 24 genomes with orthologs for HER17_RS08185 only