Conservation of cofitness between HER17_RS01965 and HER17_RS08130 in Pectobacterium carotovorum WPP14

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01965 peptidylprolyl isomerase 1.0 HER17_RS08130 protein phosphatase CheZ 0.79 13
Dickeya dianthicola ME23 0.72 DZA65_RS20605 peptidylprolyl isomerase 0.89 DZA65_RS14045 protein phosphatase CheZ 0.88 4
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3723 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.73 GFF1662 Chemotaxis response - phosphatase CheZ low > 78
Dickeya dadantii 3937 0.71 DDA3937_RS19395 peptidylprolyl isomerase 0.88 DDA3937_RS13515 protein phosphatase CheZ 0.56 29
Dickeya dianthicola 67-19 0.71 HGI48_RS19515 peptidylprolyl isomerase 0.89 HGI48_RS13560 protein phosphatase CheZ low > 71
Escherichia coli ECRC102 0.71 NIAGMN_15055 slyD peptidylprolyl isomerase 0.72 NIAGMN_01900 cheZ protein phosphatase CheZ — —
Escherichia coli ECOR27 0.71 NOLOHH_09085 slyD peptidylprolyl isomerase 0.72 NOLOHH_16600 cheZ protein phosphatase CheZ low > 75
Escherichia coli ECRC99 0.71 KEDOAH_10855 slyD peptidylprolyl isomerase 0.72 KEDOAH_01945 cheZ protein phosphatase CheZ — —
Escherichia coli Nissle 1917 0.71 ECOLIN_RS19180 peptidylprolyl isomerase 0.72 ECOLIN_RS10745 protein phosphatase CheZ — —
Escherichia coli BL21 0.71 ECD_03200 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 0.72 ECD_01852 chemotaxis regulator, protein phosphatase for CheY low > 61
Escherichia coli ECOR38 0.71 HEPCGN_16115 slyD peptidylprolyl isomerase 0.72 HEPCGN_04580 cheZ protein phosphatase CheZ low > 87
Escherichia coli ECRC101 0.71 MCAODC_07815 slyD peptidylprolyl isomerase 0.72 MCAODC_19245 cheZ protein phosphatase CheZ low > 87
Escherichia coli ECRC98 0.71 JDDGAC_20915 slyD peptidylprolyl isomerase 0.72 JDDGAC_00735 cheZ protein phosphatase CheZ low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00354 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.72 OHPLBJKB_01847 Protein phosphatase CheZ low > 73
Escherichia coli BW25113 0.71 b3349 slyD FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) 0.72 b1881 cheZ chemotaxis regulator, protein phosphatase for CheY (NCBI) low > 76
Escherichia fergusonii Becca 0.71 EFB2_00474 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.72 EFB2_02062 Protein phosphatase CheZ low > 86
Pantoea sp. MT58 0.71 IAI47_02040 peptidylprolyl isomerase 0.75 IAI47_08340 protein phosphatase CheZ low > 76
Escherichia coli ECRC100 0.71 OKFHMN_17285 slyD peptidylprolyl isomerase 0.72 OKFHMN_26160 cheZ protein phosphatase CheZ low > 80
Escherichia coli ECRC62 0.71 BNILDI_02435 slyD peptidylprolyl isomerase 0.72 BNILDI_15390 cheZ protein phosphatase CheZ low > 75
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4181 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.73 EX28DRAFT_0675 Chemotaxis protein low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_04242 hypothetical protein 0.73 MPMX20_02785 Protein phosphatase CheZ low > 85
Erwinia tracheiphila SCR3 0.65 LU632_RS22725 slyD peptidylprolyl isomerase 0.76 LU632_RS13515 cheZ protein phosphatase CheZ low > 74
Shewanella amazonensis SB2B 0.36 Sama_0904 peptidyl-prolyl cis-trans isomerase SlyD (RefSeq) 0.26 Sama_2278 putative chemotaxis phosphatase, CheZ (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_02725 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.27 MIT1002_01105 chemotaxis regulator CheZ low > 70
Shewanella loihica PV-4 0.35 Shew_1078 peptidylprolyl isomerase, FKBP-type (RefSeq) 0.28 Shew_1385 chemotaxis phosphatase, CheZ (RefSeq) 0.43 41
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS00495 peptidylprolyl isomerase 0.15 ABZR86_RS20275 protein phosphatase CheZ — —
Pseudomonas stutzeri RCH2 0.34 Psest_3212 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.26 Psest_1742 Chemotaxis protein low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_1009 Peptidylprolyl isomerase, FKBP-type 0.28 Psyr_3435 chemotaxis phosphatase, CheZ — —
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_1009 Peptidylprolyl isomerase, FKBP-type 0.28 Psyr_3435 chemotaxis phosphatase, CheZ low > 86
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5262 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.25 Pf6N2E2_2571 Chemotaxis response - phosphatase CheZ low > 103
Pseudomonas sp. RS175 0.33 PFR28_00197 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.24 PFR28_00854 Protein phosphatase CheZ low > 88
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_16690 peptidylprolyl isomerase 0.25 AO356_03720 protein phosphatase low > 104
Pseudomonas simiae WCS417 0.33 PS417_03740 peptidylprolyl isomerase 0.26 PS417_19685 protein phosphatase low > 88
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS03790 peptidylprolyl isomerase 0.25 PFLU_RS21650 protein phosphatase CheZ low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS03790 peptidylprolyl isomerase 0.25 PFLU_RS21650 protein phosphatase CheZ low > 109
Pseudomonas putida KT2440 0.33 PP_0776 FKBP-type peptidyl-prolyl cis-trans isomerase 0.27 PP_4339 Protein phosphatase CheZ — —
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4988 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.25 PfGW456L13_4329 Chemotaxis response - phosphatase CheZ low > 87
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_05055 peptidylprolyl isomerase 0.26 AO353_18795 protein phosphatase low > 101
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1052 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.26 Pf1N1B4_3628 Chemotaxis response - phosphatase CheZ — —
Ralstonia solanacearum PSI07 0.30 RPSI07_RS18450 peptidylprolyl isomerase 0.49 RPSI07_RS06220 protein phosphatase CheZ low > 81
Ralstonia solanacearum GMI1000 0.30 RS_RS05725 peptidylprolyl isomerase 0.49 RS_RS23885 protein phosphatase CheZ low > 80
Ralstonia solanacearum UW163 0.29 UW163_RS12380 peptidylprolyl isomerase 0.49 UW163_RS21725 protein phosphatase CheZ — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14910 peptidylprolyl isomerase 0.49 RALBFv3_RS17425 protein phosphatase CheZ low > 76
Pseudomonas sp. S08-1 0.28 OH686_06255 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.24 OH686_02720 Chemotaxis response - phosphatase CheZ low > 80
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS16370 peptidyl-prolyl cis-trans isomerase 0.44 HSERO_RS10135 chemotaxis protein CheZ low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF3652 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.22 GFF1434 Chemotaxis response - phosphatase CheZ low > 90
Variovorax sp. SCN45 0.22 GFF7163 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.55 GFF5769 Chemotaxis response - phosphatase CheZ low > 127
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1303 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.28 Ac3H11_1386 Chemotaxis response - phosphatase CheZ low > 79

Not shown: 15 genomes with orthologs for HER17_RS01965 only; 12 genomes with orthologs for HER17_RS08130 only