Conservation of cofitness between HER17_RS02775 and HER17_RS04625 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02775 protein CreA 1.0 HER17_RS04625 S-methyl-5-thioribose-1-phosphate isomerase 0.63 7
Klebsiella michiganensis M5al 0.82 BWI76_RS04210 hypothetical protein 0.75 BWI76_RS07825 S-methyl-5-thioribose-1-phosphate isomerase low > 92
Rahnella sp. WP5 0.80 EX31_RS03960 protein CreA 0.78 EX31_RS21045 S-methyl-5-thioribose-1-phosphate isomerase low > 89
Dickeya dadantii 3937 0.79 DDA3937_RS18430 protein CreA 0.84 DDA3937_RS16605 S-methyl-5-thioribose-1-phosphate isomerase low > 74
Serratia liquefaciens MT49 0.78 IAI46_03010 protein CreA 0.82 IAI46_04320 S-methyl-5-thioribose-1-phosphate isomerase 0.54 2
Pantoea sp. MT58 0.78 IAI47_16235 protein CreA 0.76 IAI47_15205 S-methyl-5-thioribose-1-phosphate isomerase low > 76
Dickeya dianthicola 67-19 0.78 HGI48_RS18360 protein CreA 0.83 HGI48_RS16675 S-methyl-5-thioribose-1-phosphate isomerase low > 71
Dickeya dianthicola ME23 0.78 DZA65_RS19500 protein CreA 0.83 DZA65_RS17765 S-methyl-5-thioribose-1-phosphate isomerase low > 75
Enterobacter sp. TBS_079 0.77 MPMX20_00704 hypothetical protein 0.76 MPMX20_01264 Methylthioribose-1-phosphate isomerase low > 85
Enterobacter asburiae PDN3 0.77 EX28DRAFT_3607 Uncharacterized protein conserved in bacteria 0.75 EX28DRAFT_2358 S-methyl-5-thioribose-1-phosphate isomerase low > 76
Escherichia coli Nissle 1917 0.75 ECOLIN_RS25235 protein CreA 0.31 ECOLIN_RS27000 S-methyl-5-thioribose-1-phosphate isomerase low > 55
Pseudomonas stutzeri RCH2 0.63 Psest_3383 Uncharacterized protein conserved in bacteria 0.33 Psest_1981 S-methyl-5-thioribose-1-phosphate isomerase low > 67
Pseudomonas sp. S08-1 0.62 OH686_16310 Conserved uncharacterized protein CreA 0.32 OH686_20855 S-methyl-5-thioribose-1-phosphate isomerase low > 80
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_15820 hypothetical protein 0.33 AO356_03480 methylthioribose-1-phosphate isomerase low > 104
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_0705 CreA 0.33 Psyr_3648 methylthioribose-1-phosphate isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_0705 CreA 0.33 Psyr_3648 methylthioribose-1-phosphate isomerase low > 86
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_1473 Conserved uncharacterized protein CreA 0.33 PfGW456L13_2173 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) low > 87
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_5104 Conserved uncharacterized protein CreA 0.31 Pf6N2E2_2523 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) low > 103
Pseudomonas sp. RS175 0.60 PFR28_03768 hypothetical protein 0.32 PFR28_00903 Methylthioribose-1-phosphate isomerase low > 88
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_2801 Conserved uncharacterized protein CreA 0.32 Pf1N1B4_354 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS25355 CreA family protein 0.31 PFLU_RS08080 S-methyl-5-thioribose-1-phosphate isomerase low > 109
Pseudomonas fluorescens SBW25 0.60 PFLU_RS25355 CreA family protein 0.31 PFLU_RS08080 S-methyl-5-thioribose-1-phosphate isomerase low > 109
Pseudomonas putida KT2440 0.60 PP_0692 conserved protein of unknown function 0.27 PP_1766 methylthioribose-1-phosphate isomerase low > 96
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_14120 hypothetical protein 0.33 AO353_02085 methylthioribose-1-phosphate isomerase low > 101
Pseudomonas simiae WCS417 0.59 PS417_23540 CreA 0.31 PS417_08110 methylthioribose-1-phosphate isomerase low > 88
Rhodospirillum rubrum S1H 0.53 Rru_A2083 CreA (NCBI) 0.32 Rru_A0360 Initiation factor 2B alpha/beta/delta (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.52 AMB_RS22685 hypothetical protein 0.28 AMB_RS20850 S-methyl-5-thioribose-1-phosphate isomerase low > 64
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS04425 CreA family protein 0.36 QEN71_RS36075 S-methyl-5-thioribose-1-phosphate isomerase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04326 CreA protein 0.36 H281DRAFT_02707 methylthioribose-1-phosphate isomerase (EC 5.3.1.23) low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.45 DVU0573 creA creA protein (TIGR) 0.35 DVU0084 translation initiation factor, aIF-2BI family, putative (TIGR) low > 55
Bosea sp. OAE506 0.44 ABIE41_RS20870 CreA family protein 0.30 ABIE41_RS11215 S-methyl-5-thioribose-1-phosphate isomerase low > 77
Dinoroseobacter shibae DFL-12 0.31 Dshi_3321 CreA family protein (RefSeq) 0.32 Dshi_0521 eIF-2B alpha/beta/delta-related uncharacterized protein (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.27 SMc01465 CREA protein 0.32 SM_b20624 methylthioribose-1-phosphate isomerase low > 103
Rhizobium sp. OAE497 0.27 ABIE40_RS11755 CreA family protein 0.31 ABIE40_RS25155 S-methyl-5-thioribose-1-phosphate isomerase low > 107
Azospirillum sp. SherDot2 0.24 MPMX19_00443 hypothetical protein 0.26 MPMX19_02375 Methylthioribose-1-phosphate isomerase low > 112

Not shown: 29 genomes with orthologs for HER17_RS02775 only; 18 genomes with orthologs for HER17_RS04625 only